Gene- and Species-Specific Hox mRNA Translation by Ribosome Expansion Segments
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Title
Gene- and Species-Specific Hox mRNA Translation by Ribosome Expansion Segments
Authors
Keywords
RNA structure, mRNA translation, ribosome, internal initiation, internal ribosome entry site, stem-loop, Hox cluster, RNA-protein interaction, yeast, ribosomal RNA, ribosome engineering, expansion segment, ES9S
Journal
MOLECULAR CELL
Volume 80, Issue 6, Pages 980-995.e13
Publisher
Elsevier BV
Online
2020-11-16
DOI
10.1016/j.molcel.2020.10.023
References
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Note: Only part of the references are listed.- The Enigmatic HOX Genes: Can We Crack Their Code?
- (2019) Zhifei Luo et al. Cancers
- Hox genes: Downstream “effectors” of retinoic acid signaling in vertebrate embryogenesis
- (2019) Christof Nolte et al. GENESIS
- Retinoic acid signaling pathways
- (2019) Norbert B. Ghyselinck et al. DEVELOPMENT
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- (2018) Takanori Nakane et al. eLife
- The Expansion Segments of 28S Ribosomal RNA Extensively Match Human Messenger RNAs
- (2018) Michael S. Parker et al. Frontiers in Genetics
- Variant ribosomal RNA alleles are conserved and exhibit tissue-specific expression
- (2018) Matthew M. Parks et al. Science Advances
- The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life
- (2018) Naomi R. Genuth et al. MOLECULAR CELL
- Translational Control during Developmental Transitions
- (2018) Felipe Karam Teixeira et al. Cold Spring Harbor Perspectives in Biology
- Decoding the Function of Expansion Segments in Ribosomes
- (2018) Kotaro Fujii et al. MOLECULAR CELL
- Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide
- (2017) Zhen Shi et al. MOLECULAR CELL
- Visualization of chemical modifications in the human 80S ribosome structure
- (2017) S. Kundhavai Natchiar et al. NATURE
- MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
- (2017) Shawn Q Zheng et al. NATURE METHODS
- Functional 5′ UTR mRNA structures in eukaryotic translation regulation and how to find them
- (2017) Kathrin Leppek et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- In vitro analysis of RQC activities provides insights into the mechanism and function of CAT tailing
- (2017) Beatriz A Osuna et al. eLife
- Gctf: Real-time CTF determination and correction
- (2016) Kai Zhang JOURNAL OF STRUCTURAL BIOLOGY
- Eukaryote-specific rRNA expansion segments function in ribosome biogenesis
- (2016) Madhumitha Ramesh et al. RNA
- Ribosomal 18S rRNA base pairs with mRNA during eukaryotic translation initiation
- (2016) Franck Martin et al. Nature Communications
- Analysis of dynamic changes in retinoid-induced transcription and epigenetic profiles of murineHoxclusters in ES cells
- (2015) Bony De Kumar et al. GENOME RESEARCH
- Structure and Assembly Pathway of the Ribosome Quality Control Complex
- (2015) Sichen Shao et al. MOLECULAR CELL
- Cryo-EM structure of Hepatitis C virus IRES bound to the human ribosome at 3.9-Å resolution
- (2015) Nick Quade et al. Nature Communications
- Consistent global structures of complex RNA states through multidimensional chemical mapping
- (2015) Clarence Yu Cheng et al. eLife
- Fragile X Mental Retardation Protein Regulates Translation by Binding Directly to the Ribosome
- (2014) Eileen Chen et al. MOLECULAR CELL
- RNA regulons in Hox 5′ UTRs confer ribosome specificity to gene regulation
- (2014) Shifeng Xue et al. NATURE
- Cationic lipid-mediated delivery of proteins enables efficient protein-based genome editing in vitro and in vivo
- (2014) John A Zuris et al. NATURE BIOTECHNOLOGY
- Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo
- (2014) D. Matsuda et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The new frontier of genome engineering with CRISPR-Cas9
- (2014) J. A. Doudna et al. SCIENCE
- Roquin Promotes Constitutive mRNA Decay via a Conserved Class of Stem-Loop Recognition Motifs
- (2013) Kathrin Leppek et al. CELL
- The regulation of Hox gene expression during animal development
- (2013) Moisés Mallo et al. DEVELOPMENT
- Structures of the human and Drosophila 80S ribosome
- (2013) Andreas M. Anger et al. NATURE
- Great ape genetic diversity and population history
- (2013) Javier Prado-Martinez et al. NATURE
- Genome engineering using the CRISPR-Cas9 system
- (2013) F Ann Ran et al. Nature Protocols
- An optimized streptavidin-binding RNA aptamer for purification of ribonucleoprotein complexes identifies novel ARE-binding proteins
- (2013) Kathrin Leppek et al. NUCLEIC ACIDS RESEARCH
- HCV IRES interacts with the 18S rRNA to activate the 40S ribosome for subsequent steps of translation initiation
- (2013) A. A. Malygin et al. NUCLEIC ACIDS RESEARCH
- An evolutionary conserved pattern of 18S rRNA sequence complementarity to mRNA 5′ UTRs and its implications for eukaryotic gene translation regulation
- (2013) Josef Pánek et al. NUCLEIC ACIDS RESEARCH
- Excessive versus Physiologically Relevant Levels of Retinoic Acid in Embryonic Stem Cell Differentiation
- (2013) Bilal N. Sheikh et al. STEM CELLS
- RELION: Implementation of a Bayesian approach to cryo-EM structure determination
- (2012) Sjors H.W. Scheres JOURNAL OF STRUCTURAL BIOLOGY
- The structures of nonprotein-coding RNAs that drive internal ribosome entry site function
- (2012) Terra-Dawn M. Plank et al. Wiley Interdisciplinary Reviews-RNA
- Ribosome-Mediated Specificity in Hox mRNA Translation and Vertebrate Tissue Patterning
- (2011) Nadya Kondrashov et al. CELL
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Yeast 18 S rRNA Is Directly Involved in the Ribosomal Response to Stringent AUG Selection during Translation Initiation
- (2010) Naoki Nemoto et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Noncytotoxic Inhibition of Viral Infection through eIF4F-Independent Suppression of Translation by 4EGi-1
- (2010) R. McMahon et al. JOURNAL OF VIROLOGY
- Human Pat1b Connects Deadenylation with mRNA Decapping and Controls the Assembly of Processing Bodies
- (2010) S. Ozgur et al. MOLECULAR AND CELLULAR BIOLOGY
- The mechanism of eukaryotic translation initiation and principles of its regulation
- (2010) Richard J. Jackson et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution
- (2010) J.-P. Armache et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets
- (2009) Nahum Sonenberg et al. CELL
- A role for ubiquitin in the clearance of nonfunctional rRNAs
- (2009) K. Fujii et al. GENES & DEVELOPMENT
- Antisense Masking Reveals Contributions of mRNA-rRNA Base Pairing to Translation ofGtxandFGF2mRNAs
- (2008) Panagiotis Panopoulos et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Mouse Ribosomal RNA Genes Contain Multiple Differentially Regulated Variants
- (2008) Hung Tseng et al. PLoS One
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