Transcription factor C/EBPβ induces genome-wide H3K27ac and upregulates gene expression during decidualization of human endometrial stromal cells

Wilms tumor 1 regulates lipid accumulation in human endometrial stromal cells during decidualization

(2020) Isao Tamura et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

C/EBPβ regulates Vegf gene expression in granulosa cells undergoing luteinization during ovulation in female rats

(2019) Masahiro Shinagawa et al.   Scientific Reports

Genome-wide DNA methylation analysis revealed stable DNA methylation status during decidualization in human endometrial stromal cells

(2019) Ryo Maekawa et al.   BMC GENOMICS

Glucose regulates the histone acetylation of gene promoters in decidualizing stromal cells

(2019) Kosuke Jozaki et al.   REPRODUCTION

The distal upstream region of insulin-like growth factor–binding protein-1 enhances its expression in endometrial stromal cells during decidualization

(2018) Isao Tamura et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ChIP‐Atlas: a data‐mining suite powered by full integration of public ChIP‐seq data

(2018) Shinya Oki et al.   EMBO REPORTS

Novel Function of a Transcription Factor WT1 in Regulating Decidualization in Human Endometrial Stromal Cells and Its Molecular Mechanism

(2017) Isao Tamura et al.   ENDOCRINOLOGY

Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface

(2017) Mihaela Pavličev et al.   GENOME RESEARCH

Downregulation of decidual SP1 and P300 is associated with severe preeclampsia

(2017) Yachao Zhang et al.   JOURNAL OF MOLECULAR ENDOCRINOLOGY

YAP mediates human decidualization of the uterine endometrial stromal cells

(2017) Hengxi Chen et al.   PLACENTA

Literature Review on the Role of Uterine Fibroids in Endometrial Function

(2017) Deborah E. Ikhena et al.   Reproductive Sciences

Epigenetic Changes of the Cyp11a1 Promoter Region in Granulosa Cells Undergoing Luteinization During Ovulation in Female Rats

(2016) Maki Okada et al.   ENDOCRINOLOGY

Tissue-Specific Expression of Estrogen Receptor 1 Is Regulated by DNA Methylation in a T-DMR

(2016) Ryo Maekawa et al.   MOLECULAR ENDOCRINOLOGY

Conserved Senescence Associated Genes and Pathways in Primary Human Fibroblasts Detected by RNA-Seq

(2016) S. Marthandan et al.   PLoS One

Uterine glucocorticoid receptors are critical for fertility in mice through control of embryo implantation and decidualization

(2015) Shannon D. Whirledge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functionally distinct patterns of nucleosome remodeling at enhancers in glucocorticoid-treated acute lymphoblastic leukemia

(2015) Jennifer N. Wu et al.   Epigenetics & Chromatin

EpiFactors: a comprehensive database of human epigenetic factors and complexes

(2015) Yulia A. Medvedeva et al.   Database-The Journal of Biological Databases and Curation

YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

(2015) Claudia Stein et al.   PLoS Genetics

Cyclic Decidualization of the Human Endometrium in Reproductive Health and Failure

(2014) Birgit Gellersen et al.   ENDOCRINE REVIEWS

Genome-Wide Analysis of Histone Modifications in Human Endometrial Stromal Cells

(2014) Isao Tamura et al.   MOLECULAR ENDOCRINOLOGY

Transforming Growth Factor-Beta 1 (TGF-B1) Liberation from Its Latent Complex During Embryo Implantation and Its Regulation by Estradiol in Mouse1

(2013) Vineet Kumar Maurya et al.   BIOLOGY OF REPRODUCTION

Importance of C/EBPβ Binding and Histone Acetylation Status in the Promoter Regions for Induction of IGFBP-1, PRL, and Mn-SOD by cAMP in Human Endometrial Stromal Cells

(2013) Isao Tamura et al.   ENDOCRINOLOGY

Dynamic epigenetic enhancer signatures reveal key transcription factors associated with monocytic differentiation states

(2012) T.-H. Pham et al.   BLOOD

Induction of IGFBP-1 Expression by cAMP Is Associated with Histone Acetylation Status of the Promoter Region in Human Endometrial Stromal Cells

(2012) Isao Tamura et al.   ENDOCRINOLOGY

Changes in Histone Modification and DNA Methylation of the StAR and Cyp19a1 Promoter Regions in Granulosa Cells Undergoing Luteinization during Ovulation In Rats

(2012) Lifa Lee et al.   ENDOCRINOLOGY

A High-Throughput Chromatin Immunoprecipitation Approach Reveals Principles of Dynamic Gene Regulation in Mammals

(2012) Manuel Garber et al.   MOLECULAR CELL

Regulation of Human Endometrial Stromal Proliferation and Differentiation by C/EBPβ Involves Cyclin E-cdk2 and STAT3

(2012) Wei Wang et al.   MOLECULAR ENDOCRINOLOGY

The classification of mRNA expression levels by the phosphorylation state of RNAPII CTD based on a combined genome-wide approach

(2011) Jun Odawara et al.   BMC GENOMICS

Extensive chromatin remodelling and establishment of transcription factor ‘hotspots’ during early adipogenesis

(2011) Rasmus Siersbaek et al.   EMBO JOURNAL

Pioneer transcription factors: establishing competence for gene expression

(2011) K. S. Zaret et al.   GENES & DEVELOPMENT

Differential Effects of Progesterone on COX-2 and Mn-SOD Expressions Are Associated with Histone Acetylation Status of the Promoter Region in Human Endometrial Stromal Cells

(2011) Isao Tamura et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation

(2010) Qihuang Jin et al.   EMBO JOURNAL

The Protein Kinase A Pathway-Regulated Transcriptome of Endometrial Stromal Fibroblasts Reveals Compromised Differentiation and Persistent Proliferative Potential in Endometriosis

(2010) Lusine Aghajanova et al.   ENDOCRINOLOGY

Progesterone Increases Manganese Superoxide Dismutase Expression via a cAMP-Dependent Signaling Mediated by Noncanonical Wnt5a Pathway in Human Endometrial Stromal Cells

(2010) Aki Matsuoka et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Review: LIF and IL11 in trophoblast-endometrial interactions during the establishment of pregnancy

(2010) E. Dimitriadis et al.   PLACENTA

Natural Selection of Human Embryos: Impaired Decidualization of Endometrium Disables Embryo-Maternal Interactions and Causes Recurrent Pregnancy Loss

(2010) Madhuri Salker et al.   PLoS One

Acetylation curtails nucleosome binding, not stable nucleosome remodeling, by FoxO1

(2009) M. Hatta et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Interleukin 1 Signaling Is Regulated by Leukemia Inhibitory Factor (LIF) and Is Aberrant in Lif−/− Mouse Uterus1

(2008) A.A. Fouladi-Nashta et al.   BIOLOGY OF REPRODUCTION

The Organization of Histone H3 Modifications as Revealed by a Panel of Specific Monoclonal Antibodies

(2008) Hiroshi Kimura et al.   CELL STRUCTURE AND FUNCTION

NLRX1 is a regulator of mitochondrial antiviral immunity

(2008) Chris B. Moore et al.   NATURE

Combinatorial patterns of histone acetylations and methylations in the human genome

(2008) Zhibin Wang et al.   NATURE GENETICS

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY