EpiFactors: a comprehensive database of human epigenetic factors and complexes

Function and information content of DNA methylation

(2015) Dirk Schübeler   NATURE

Effects of cytosine methylation on transcription factor binding sites

(2014) Yulia A Medvedeva et al.   BMC GENOMICS

Chromatin Repressive Complexes in Stem Cells, Development, and Cancer

(2014) Anne Laugesen et al.   Cell Stem Cell

Chromatin regulation: How complex does it get?

(2014) Karin Meier et al.   Epigenetics

A promoter-level mammalian expression atlas

(2014)   NATURE

MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data

(2014) Dong Zou et al.   NUCLEIC ACIDS RESEARCH

The complex portal - an encyclopaedia of macromolecular complexes

(2014) Birgit H.M. Meldal et al.   NUCLEIC ACIDS RESEARCH

MethHC: a database of DNA methylation and gene expression in human cancer

(2014) Wei-Yun Huang et al.   NUCLEIC ACIDS RESEARCH

Promoter Analysis Reveals Globally Differential Regulation of Human Long Non-Coding RNA and Protein-Coding Genes

(2014) Tanvir Alam et al.   PLoS One

EPITRANS: A database that integrates epigenome and transcriptome data

(2013) Soo Young Cho et al.   MOLECULES AND CELLS

TET enzymes, TDG and the dynamics of DNA demethylation

(2013) Rahul M. Kohli et al.   NATURE

Chromatin proteins and modifications as drug targets

(2013) Kristian Helin et al.   NATURE

Mutations in regulators of the epigenome and their connections to global chromatin patterns in cancer

(2013) Christoph Plass et al.   NATURE REVIEWS GENETICS

Histone chaperones in nucleosome assembly and human disease

(2013) Rebecca J Burgess et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Regional differences in gene expression and promoter usage in aged human brains

(2013) Luba M. Pardo et al.   NEUROBIOLOGY OF AGING

The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases

(2013) Sandra Orchard et al.   NUCLEIC ACIDS RESEARCH

CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse

(2013) Qixuan Wang et al.   NUCLEIC ACIDS RESEARCH

PEpiD: A Prostate Epigenetic Database in Mammals

(2013) Jiejun Shi et al.   PLoS One

Epigenetics: The missing link to understanding β-cell dysfunction in the pathogenesis of type 2 diabetes

(2012) Elizabeth R. Gilbert et al.   Epigenetics

Cfp1 integrates both CpG content and gene activity for accurate H3K4me3 deposition in embryonic stem cells

(2012) T. Clouaire et al.   GENES & DEVELOPMENT

PCGF Homologs, CBX Proteins, and RYBP Define Functionally Distinct PRC1 Family Complexes

(2012) Zhonghua Gao et al.   MOLECULAR CELL

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

NCBI Epigenomics: What’s new for 2013

(2012) Ian M. Fingerman et al.   NUCLEIC ACIDS RESEARCH

HOCOMOCO: a comprehensive collection of human transcription factor binding sites models

(2012) Ivan V. Kulakovskiy et al.   NUCLEIC ACIDS RESEARCH

Extensive Transcriptional Regulation of Chromatin Modifiers during Human Neurodevelopment

(2012) Matthias K. Weng et al.   PLoS One

The NIH Roadmap Epigenomics Program data resource

(2012) Lisa Helbling Chadwick   Epigenomics

Readers of histone modifications

(2011) Miyong Yun et al.   CELL RESEARCH

Regulation of chromatin by histone modifications

(2011) Andrew J Bannister et al.   CELL RESEARCH

Identification of genetic elements that autonomously determine DNA methylation states

(2011) Florian Lienert et al.   NATURE GENETICS

Trithorax group proteins: switching genes on and keeping them active

(2011) Bernd Schuettengruber et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

HIstome--a relational knowledgebase of human histone proteins and histone modifying enzymes

(2011) S. P. Khare et al.   NUCLEIC ACIDS RESEARCH

The Histone Database: an integrated resource for histones and histone fold-containing proteins

(2011) L. Marino-Ramirez et al.   Database-The Journal of Biological Databases and Curation

Genome-wide conserved consensus transcription factor binding motifs are hyper-methylated

(2010) Mun-Kit Choy et al.   BMC GENOMICS

Dynamic Interplay between Histone H3 Modifications and Protein Interpreters: Emerging Evidence for a “Histone Language”

(2010) Samuel S. Oliver et al.   CHEMBIOCHEM

Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains

(2010) V. K. Rakyan et al.   GENOME RESEARCH

NCBI Epigenomics: a new public resource for exploring epigenomic data sets

(2010) I. M. Fingerman et al.   NUCLEIC ACIDS RESEARCH

NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data

(2010) M. Hackenberg et al.   NUCLEIC ACIDS RESEARCH

Role of epigenetics in Alzheimer’s and Parkinson’s disease

(2010) John BJ Kwok   Epigenomics

X inactivation and the complexities of silencing a sex chromosome

(2009) Jennifer Chow et al.   CURRENT OPINION IN CELL BIOLOGY

HHMD: the human histone modification database

(2009) Yan Zhang et al.   NUCLEIC ACIDS RESEARCH

Predicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activities

(2009) Vladimir B. Teif et al.   NUCLEIC ACIDS RESEARCH

Crosstalk between histone modifications during the DNA damage response

(2009) Haico van Attikum et al.   TRENDS IN CELL BIOLOGY

Comprehensive genomic characterization defines human glioblastoma genes and core pathways

(2008) Roger McLendon et al.   NATURE