Multiple transcriptome mining coupled with tissue specific molecular cloning and mass spectrometry provide insights into agatoxin-like peptide conservation in decapod crustaceans

Identification of putative neuropeptidergic signaling systems in the spiny lobster, Panulirus argus

(2020) Andrew E. Christie   INVERTEBRATE NEUROSCIENCE

Identification of Peptides and Their GPCRs in the Peppermint Shrimp Lysmata vittata, a Protandric Simultaneous Hermaphrodite Species

(2020) Chenchang Bao et al.   Frontiers in Endocrinology

Transcriptomic characterisation of neuropeptides and their putative cognate G protein-coupled receptors during late embryo and stage-1 juvenile development of the Aotearoa-New Zealand crayfish, Paranephrops zealandicus

(2020) Andrew Oliphant et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Comparative transcriptomic characterization of the eyestalk in Pacific white shrimp (Litopenaeus vannamei) during ovarian maturation

(2019) Zhongkai Wang et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

The molecular basis of freshwater adaptation in prawns: Insights from comparative transcriptomics of three Macrobrachium species

(2019) Md. Lifat Rahi et al.   Genome Biology and Evolution

Characterization of G-protein coupled receptors from the blackback land crab Gecarcinus lateralis Y organ transcriptome over the molt cycle

(2019) Nhut M. Tran et al.   BMC GENOMICS

De Novo assembly and characterisation of the greentail prawn (Metapenaeus bennettae) hepatopancreas transcriptome – identification of stress response and detoxification transcripts

(2019) Emily K. Armstrong et al.   Marine Genomics

What can transcriptomics reveal about the phylogenetic/structural conservation, tissue localization, and possible functions of CNMamide peptides in decapod crustaceans?

(2019) Andrew E. Christie et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Transcriptomic and Neuropeptidomic Analysis of the Stick Insect, Carausius morosus

(2018) Sander Liessem et al.   JOURNAL OF PROTEOME RESEARCH

De novo transcriptome assembly and functional annotation of the southern rock lobster ( Jasus edwardsii )

(2018) Carla Anjos Souza et al.   Marine Genomics

Molecular evidence for an intrinsic circadian pacemaker in the cardiac ganglion of the American lobster, Homarus americanus - Is diel cycling of heartbeat frequency controlled by a peripheral clock system?

(2018) Andrew E. Christie et al.   Marine Genomics

Circadian signaling in Homarus americanus : Region-specific de novo assembled transcriptomes show that both the brain and eyestalk ganglia possess the molecular components of a putative clock system

(2018) Andrew E. Christie et al.   Marine Genomics

Litopenaeus vannamei Transcriptome Profile of Populations Evaluated for Growth Performance and Exposed to White Spot Syndrome Virus (WSSV)

(2018) Camilla A. Santos et al.   Frontiers in Genetics

Transcriptomic analysis of crustacean neuropeptide signaling during the moult cycle in the green shore crab, Carcinus maenas

(2018) Andrew Oliphant et al.   BMC GENOMICS

Identifying neuropeptide GPCRs in the mud crab, Scylla paramamosain, by combinatorial bioinformatics analysis

(2018) Chenchang Bao et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

De novo assembly, characterization, functional annotation and expression patterns of the black tiger shrimp (Penaeus monodon) transcriptome

(2018) Roger Huerlimann et al.   Scientific Reports

Molecular characterization of putative neuropeptide, amine, diffusible gas and small molecule transmitter biosynthetic enzymes in the eyestalk ganglia of the American lobster, Homarus americanus

(2018) Andrew E. Christie et al.   INVERTEBRATE NEUROSCIENCE

Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome

(2017) Andrew E. Christie et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Transcriptomic variation of eyestalk reveals the genes and biological processes associated with molting in Portunus trituberculatus

(2017) Jianjian Lv et al.   PLoS One

Deep sequencing of transcriptomes from the nervous systems of two decapod crustaceans to characterize genes important for neural circuit function and modulation

(2016) Adam J. Northcutt et al.   BMC GENOMICS

In silico prediction of the G-protein coupled receptors expressed during the metamorphic molt of Sagmariasus verreauxi (Crustacea: Decapoda) by mining transcriptomic data: RNA-seq to repertoire

(2016) Sean J. Buckley et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Prediction of Scylla olivacea (Crustacea; Brachyura) peptide hormones using publicly accessible transcriptome shotgun assembly (TSA) sequences

(2016) Andrew E. Christie   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Developmental Transcriptomics of the Hawaiian Anchialine ShrimpHalocaridina rubraHolthuis, 1963 (Crustacea: Atyidae)

(2016) Justin C. Havird et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Agatoxin-like peptides in the neuroendocrine system of the honey bee and other insects

(2016) Sebastian Sturm et al.   Journal of Proteomics

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Similarities between decapod and insect neuropeptidomes

(2016) Jan A. Veenstra   PeerJ

Transcriptomic characterization and curation of candidate neuropeptides regulating reproduction in the eyestalk ganglia of the Australian crayfish, Cherax quadricarinatus

(2016) Tuan Viet Nguyen et al.   Scientific Reports

De novo assembly of the Carcinus maenas transcriptome and characterization of innate immune system pathways

(2015) Bas Verbruggen et al.   BMC GENOMICS

Transcriptome profiling of the eyestalk of precocious juvenile Chinese mitten crab reveals putative neuropeptides and differentially expressed genes

(2015) Zhiqiang Xu et al.   GENE

The eyestalk transcriptome of red swamp crayfish Procambarus clarkii

(2015) Chiara Manfrin et al.   GENE

The power of next-generation sequencing as illustrated by the neuropeptidome of the crayfish Procambarus clarkii

(2015) Jan A. Veenstra   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Neuropeptides in the cerebral ganglia of the mud crab, Scylla paramamosain: transcriptomic analysis and expression profiles during vitellogenesis

(2015) Chenchang Bao et al.   Scientific Reports

Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level

(2015) Federico Abascal et al.   PLoS Computational Biology

Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing

(2015) Andrew E. Christie et al.   PLoS One

De Novo sequencing and transcriptome analysis for Tetramorium bicarinatum: a comprehensive venom gland transcriptome analysis from an ant species

(2014) Wafa Bouzid et al.   BMC GENOMICS

Different transcription regulation routes are exerted by L- and D-amino acid enantiomers of peptide hormones

(2014) M. Tom et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Transcriptome Analysis in Venom Gland of the Predatory Giant Ant Dinoponera quadriceps: Insights into the Polypeptide Toxin Arsenal of Hymenopterans

(2014) Alba F. C. Torres et al.   PLoS One

Analysis of the Central Nervous System Transcriptome of the Eastern Rock Lobster Sagmariasus verreauxi Reveals Its Putative Neuropeptidome

(2014) Tomer Ventura et al.   PLoS One

Changes in the Organics Metabolism in the Hepatopancreas Induced by Eyestalk Ablation of the Chinese Mitten Crab Eriocheir sinensis Determined via Transcriptome and DGE Analysis

(2014) Yan Sun et al.   PLoS One

The First Venomous Crustacean Revealed by Transcriptomics and Functional Morphology: Remipede Venom Glands Express a Unique Toxin Cocktail Dominated by Enzymes and a Neurotoxin

(2013) Björn M. von Reumont et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

C-terminal methylation of truncated neuropeptides: An enzyme-assisted extraction artifact involving methanol

(2013) Elizabeth A. Stemmler et al.   PEPTIDES

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Comparative Proteomics Reveals a Significant Bias Toward Alternative Protein Isoforms with Conserved Structure and Function

(2012) I. Ezkurdia et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptome Profiling of Testis during Sexual Maturation Stages in Eriocheir sinensis Using Illumina Sequencing

(2012) Lin He et al.   PLoS One

On the Scalability and Requirements of Whole Protein Mass Spectrometry

(2011) Philip D. Compton et al.   ANALYTICAL CHEMISTRY

Crustacean neuroendocrine systems and their signaling agents

(2011) Andrew E. Christie   CELL AND TISSUE RESEARCH

Crustacean neuropeptides

(2010) Andrew E. Christie et al.   CELLULAR AND MOLECULAR LIFE SCIENCES