Microbiota associated with Mollitrichosiphum aphids (Hemiptera: Aphididae: Greenideinae): diversity, host species specificity and phylosymbiosis

An introduction to phylosymbiosis

(2020) Shen Jean Lim et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Host Plants Influence the Symbiont Diversity of Eriosomatinae (Hemiptera: Aphididae)

(2020) Ting-Ting Xu et al.   Insects

Detection and geographic distribution of seven facultative endosymbionts in two Rhopalosiphum aphid species

(2019) Jianqing Guo et al.   MicrobiologyOpen

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

(2019) Remco Bouckaert et al.   PLoS Computational Biology

Circulation of the Cultivable Symbiont Serratia symbiotica in Aphids Is Mediated by Plants

(2019) Inès Pons et al.   Frontiers in Microbiology

Comparative Analysis of Intestine Microbiota of Four Wild Waterbird Species

(2019) Sivan Laviad-Shitrit et al.   Frontiers in Microbiology

Serial horizontal transfer of vitamin-biosynthetic genes enables the establishment of new nutritional symbionts in aphids’ di-symbiotic systems

(2019) Alejandro Manzano-Marı́n et al.   ISME Journal

Host relatedness influences the composition of aphid microbiomes

(2019) Ailsa H. C. McLean et al.   Environmental Microbiology Reports

Diversity of bacteria associated with Hormaphidinae aphids (Hemiptera: Aphididae)

(2019) Ting‐Ting Xu et al.   Insect Science

The Bacterial Flora Associated with the Polyphagous Aphid Aphis gossypii Glover (Hemiptera: Aphididae) Is Strongly Affected by Host Plants

(2019) Shifen Xu et al.   MICROBIAL ECOLOGY

The price of protection: a defensive endosymbiont impairs nymph growth in the bird cherry-oat aphid, Rhopalosiphum padi

(2018) Daniel J. Leybourne et al.   Insect Science

Rates of gut microbiome divergence in mammals

(2018) Alex H. Nishida et al.   MOLECULAR ECOLOGY

Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet

(2018) Marlène Chiarello et al.   Microbiome

Multi-scale characterization of symbiont diversity in the pea aphid complex through metagenomic approaches

(2018) Cervin Guyomar et al.   Microbiome

Is Host Filtering the Main Driver of Phylosymbiosis across the Tree of Life?

(2018) Florent Mazel et al.   mSystems

Happens in the best of subfamilies: establishment and repeated replacements of co-obligate secondary endosymbionts within Lachninae aphids

(2017) Alejandro Manzano-Marín et al.   ENVIRONMENTAL MICROBIOLOGY

Context-dependent vertical transmission shapes strong endosymbiont community structure in the pea aphid, Acyrthosiphon pisum

(2017) Danielle I. Rock et al.   MOLECULAR ECOLOGY

Symbiont Acquisition and Replacement as a Source of Ecological Innovation

(2017) Sailendharan Sudakaran et al.   TRENDS IN MICROBIOLOGY

Historical and cospeciating associations between Cerataphidini aphids (Hemiptera: Aphididae: Hormaphidinae) and their primary endosymbiont Buchnera aphidicola

(2017) Ting-Ting Xu et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Unraveling the processes shaping mammalian gut microbiomes over evolutionary time

(2017) Mathieu Groussin et al.   Nature Communications

Consequences of coinfection with protective symbionts on the host phenotype and symbiont titres in the pea aphid system

(2016) Mélanie Leclair et al.   Insect Science

Diversity, frequency, and geographic distribution of facultative bacterial endosymbionts in introduced aphid pests

(2016) Daniela A. Sepúlveda et al.   Insect Science

Buchnera has changed flatmate but the repeated replacement of co-obligate symbionts is not associated with the ecological expansions of their aphid hosts

(2016) A. S. Meseguer et al.   MOLECULAR ECOLOGY

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

Phylosymbiosis: Relationships and Functional Effects of Microbial Communities across Host Evolutionary History

(2016) Andrew W. Brooks et al.   PLOS BIOLOGY

Bacterial communities of the cotton aphid Aphis gossypii associated with Bt cotton in northern China

(2016) Yao Zhao et al.   Scientific Reports

The natural occurrence of secondary bacterial symbionts in aphids

(2015) SHARON E. ZYTYNSKA et al.   ECOLOGICAL ENTOMOLOGY

Insect life history and the evolution of bacterial mutualism

(2015) Lee M. Henry et al.   ECOLOGY LETTERS

Facultative endosymbionts mediate dietary breadth in a polyphagous herbivore

(2015) Steven M. Wagner et al.   FUNCTIONAL ECOLOGY

A facultative endosymbiont in aphids can provide diverse ecological benefits

(2015) E. R. Heyworth et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Patterns, causes and consequences of defensive microbiome dynamics across multiple scales

(2015) Andrew H. Smith et al.   MOLECULAR ECOLOGY

Assessment of a 16S rRNA amplicon Illumina sequencing procedure for studying the microbiome of a symbiont-rich aphid genus

(2015) E. Jousselin et al.   Molecular Ecology Resources

Heritable symbiosis: The advantages and perils of an evolutionary rabbit hole

(2015) Gordon M. Bennett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Hologenome Concept: Helpful or Hollow?

(2015) Nancy A. Moran et al.   PLOS BIOLOGY

Bacterial Communities Associated with Host-Adapted Populations of Pea Aphids Revealed by Deep Sequencing of 16S Ribosomal DNA

(2015) Jean-Pierre Gauthier et al.   PLoS One

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Endosymbiotic microorganisms of aphids (Hemiptera: Sternorrhyncha: Aphidoidea): Ultrastructure, distribution and transovarial transmission

(2014) Anna MICHALIK et al.   EUROPEAN JOURNAL OF ENTOMOLOGY

Evolutionary relationships ofPemphigusand allied genera (Hemiptera: Aphididae: Eriosomatinae) and their primary endosymbiont,Buchnera aphidicola

(2014) Lin Liu et al.   Insect Science

Widespread infection and diverse infection patterns ofWolbachiain Chinese aphids

(2014) Zhe Wang et al.   Insect Science

Identifying Keystone Species in the Human Gut Microbiome from Metagenomic Timeseries Using Sparse Linear Regression

(2014) Charles K. Fisher et al.   PLoS One

Native microbiome impedes vertical transmission of Wolbachia in Anopheles mosquitoes

(2014) G. L. Hughes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cowpea aphid (Aphis craccivora) associated with different host plants has different facultative endosymbionts

(2013) CRISTINA M. BRADY et al.   ECOLOGICAL ENTOMOLOGY

PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?

(2013) Marti J. Anderson et al.   ECOLOGICAL MONOGRAPHS

Defensive symbiosis in the real world - advancing ecological studies of heritable, protective bacteria in aphids and beyond

(2013) Kerry M. Oliver et al.   FUNCTIONAL ECOLOGY

Worldwide Populations of the Aphid Aphis craccivora Are Infected with Diverse Facultative Bacterial Symbionts

(2013) Cristina M. Brady et al.   MICROBIAL ECOLOGY

Stability and phylogenetic correlation in gut microbiota: lessons from ants and apes

(2013) Jon G. Sanders et al.   MOLECULAR ECOLOGY

The Hologenomic Basis of Speciation: Gut Bacteria Cause Hybrid Lethality in the Genus Nasonia

(2013) R. M. Brucker et al.   SCIENCE

Microbiome diversity ofAphis glycineswith extensive superinfection in native and invasive populations

(2013) Raman Bansal et al.   Environmental Microbiology Reports

Unrelated facultative endosymbionts protect aphids against a fungal pathogen

(2012) Piotr Łukasik et al.   ECOLOGY LETTERS

Evolution and diversity ofArsenophonusendosymbionts in aphids

(2012) Emmanuelle Jousselin et al.   MOLECULAR ECOLOGY

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Cellular mechanism for selective vertical transmission of an obligate insect symbiont at the bacteriocyte-embryo interface

(2012) R. Koga et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic congruence betweenMollitrichosiphum(Aphididae: Greenideinae) andBuchneraindicates insect-bacteria parallel evolution

(2012) LIN LIU et al.   SYSTEMATIC ENTOMOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

POPULATION GENETIC STRUCTURE AND SECONDARY SYMBIONTS IN HOST-ASSOCIATED POPULATIONS OF THE PEA APHID COMPLEX

(2011) Julia Ferrari et al.   EVOLUTION

Extreme genome reduction in symbiotic bacteria

(2011) John P. McCutcheon et al.   NATURE REVIEWS MICROBIOLOGY

Detection and Characterization of Wolbachia Infections in Natural Populations of Aphids: Is the Hidden Diversity Fully Unraveled?

(2011) Antonis A. Augustinos et al.   PLoS One

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Serratia symbiotica from the Aphid Cinara cedri: A Missing Link from Facultative to Obligate Insect Endosymbiont

(2011) Araceli Lamelas et al.   PLoS Genetics

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Interspecific symbiont transfection confers a novel ecological trait to the recipient insect

(2010) T. Tsuchida et al.   Biology Letters

Genomic insight into the amino acid relations of the pea aphid, Acyrthosiphon pisum, with its symbiotic bacterium Buchnera aphidicola

(2010) A. C. C. Wilson et al.   INSECT MOLECULAR BIOLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Symbiotic Bacterium Modifies Aphid Body Color

(2010) T. Tsuchida et al.   SCIENCE

Facultative Symbionts in Aphids and the Horizontal Transfer of Ecologically Important Traits

(2009) Kerry M. Oliver et al.   Annual Review of Entomology

Impact of environmental stress on aphid clonal resistance to parasitoids: Role of Hamiltonella defensa bacterial symbiosis in association with a new facultative symbiont of the pea aphid

(2009) Jean-Frédéric Guay et al.   JOURNAL OF INSECT PHYSIOLOGY