Indicator species and co-occurrence pattern of sediment bacterial community in relation to alkaline copper mine drainage contamination

The bacterial community of Quesnel Lake sediments impacted by a catastrophic mine tailings spill differ in composition from those at undisturbed locations – two years post-spill

(2019) I. Hatam et al.   Scientific Reports

Bioremediation of strontium and technetium contaminated groundwater using glycerol phosphate

(2019) A. Cleary et al.   CHEMICAL GEOLOGY

Gene function and expression regulation of RuvRCAB in bacterial Cr(VI), As(III), Sb(III), and Cd(II) resistance

(2019) Shijuan Wu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

RNA Stable Isotope Probing of Potential Feammox Population in Paddy Soil

(2019) Hu Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Dam construction alters function and community composition of diazotrophs in riparian soils across an environmental gradient

(2019) Juan Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Simultaneous removal of elemental mercury and NO by mercury induced thermophilic community in membrane biofilm reactor

(2019) Zaishan Wei et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Diagnosis of soil contamination using microbiological indices: A review on heavy metal pollution

(2019) Jiayi Tang et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Determining stoichiometry and kinetics of two thermophilic nitrifying communities as a crucial step in the development of thermophilic nitrogen removal

(2019) Tom G.L. Vandekerckhove et al.   WATER RESEARCH

Metals and metalloids distribution, source identification, and ecological risks in riverbed sediments of the Jinsha River, China

(2019) Qiusheng Yuan et al.   JOURNAL OF GEOCHEMICAL EXPLORATION

Responses of fungal–bacterial community and network to organic inputs vary among different spatial habitats in soil

(2018) Wei Zheng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Co-occurrence patterns of soybean rhizosphere microbiome at a continental scale

(2018) Baogang Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ecological patterns and adaptability of bacterial communities in alkaline copper mine drainage

(2018) Jinxian Liu et al.   WATER RESEARCH

Population characteristics and influential factors of nitrogen cycling functional genes in heavy metal contaminated soil remediated by biochar and compost

(2018) Mingyue Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Acid mine drainage affects the diversity and metal resistance gene profile of sediment bacterial community along a river

(2018) Xiaohui Zhang et al.   CHEMOSPHERE

Microbial community succession and pollutants removal of a novel carriers enhanced duckweed treatment system for rural wastewater in Dianchi Lake basin

(2018) Guoke Chen et al.   BIORESOURCE TECHNOLOGY

Response of soil microbial communities and microbial interactions to long-term heavy metal contamination

(2017) Xiaoqi Li et al.   ENVIRONMENTAL POLLUTION

Fungal community reveals less dispersal limitation and potentially more connected network than that of bacteria in bamboo forest soils

(2017) Xian Xiao et al.   MOLECULAR ECOLOGY

Ni(II) and Cu(II) removal from aqueous solution by a heavy metal-resistance bacterium: kinetic, isotherm and mechanism studies

(2017) Haikun Zhang et al.   WATER SCIENCE AND TECHNOLOGY

Shifts among Eukaryota, Bacteria, and Archaea define the vertical organization of a lake sediment

(2017) Christian Wurzbacher et al.   Microbiome

Shift in bacterioplankton diversity and structure: Influence of anthropogenic disturbances along the Yarlung Tsangpo River on the Tibetan Plateau, China

(2017) Peifang Wang et al.   Scientific Reports

Copper Resistance of the Emerging Pathogen Acinetobacter baumannii

(2016) Caitlin L. Williams et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The effects of soil microbial and physiochemical properties on resistance and resilience to copper perturbation across China

(2016) Yuan Zhang et al.   CATENA

Network-based metabolic analysis and microbial community modeling

(2016) Cesar Cardona et al.   CURRENT OPINION IN MICROBIOLOGY

Predicting taxonomic and functional structure of microbial communities in acid mine drainage

(2016) Jialiang Kuang et al.   ISME Journal

Microbial Ecology and Evolution in the Acid Mine Drainage Model System

(2016) Li-Nan Huang et al.   TRENDS IN MICROBIOLOGY

Microbial communities in riparian soils of a settling pond for mine drainage treatment

(2016) Miaochun Fan et al.   WATER RESEARCH

Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system

(2016) Karthik Anantharaman et al.   Nature Communications

Hydrogeochemistry and microbiology of mine drainage: An update

(2015) D. Kirk Nordstrom et al.   APPLIED GEOCHEMISTRY

Environmental Legacy of Copper Metallurgy and Mongol Silver Smelting Recorded in Yunnan Lake Sediments

(2015) Aubrey L. Hillman et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A global perspective on the influence of environmental exposures on the nervous system

(2015) Desire Tshala-Katumbay et al.   NATURE

An integrated insight into the response of sedimentary microbial communities to heavy metal contamination

(2015) Huaqun Yin et al.   Scientific Reports

Mine tailings dams: Characteristics, failure, environmental impacts, and remediation

(2014) D. Kossoff et al.   APPLIED GEOCHEMISTRY

Bacterial community responses to a gradient of alkaline mountaintop mine drainage in Central Appalachian streams

(2014) Raven L Bier et al.   ISME Journal

Benthic Exchange and Biogeochemical Cycling in Permeable Sediments

(2013) Markus Huettel et al.   Annual Review of Marine Science

Risk and toxicity assessments of heavy metals in sediments and fishes from the Yangtze River and Taihu Lake, China

(2013) Jie Fu et al.   CHEMOSPHERE

Multivariate statistical techniques for evaluating and identifying the environmental significance of heavy metal contamination in sediments of the Yangtze River, China

(2013) Lan Wang et al.   Environmental Earth Sciences

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Toward the development of microbial indicators for wetland assessment

(2013) Atreyee Sims et al.   WATER RESEARCH

Comparison of the Levels of Bacterial Diversity in Freshwater, Intertidal Wetland, and Marine Sediments by Using Millions of Illumina Tags

(2012) Yu Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

New, Comprehensive Soil Chemical Methods Book for Australasia

(2012) George E. Rayment et al.   COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS

A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA

(2012) Emily L Kara et al.   ISME Journal

Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils

(2012) Byron C Crump et al.   ISME Journal

Trace element geochemistry of riverbed and suspended sediments in the upper Yangtze River

(2012) Weihua Wu et al.   JOURNAL OF GEOCHEMICAL EXPLORATION

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

The Influence of Long-Term Copper Contaminated Agricultural Soil at Different pH Levels on Microbial Communities and Springtail Transcriptional Regulation

(2011) Tjalf E. de Boer et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist

(2010) Marti J. Anderson et al.   ECOLOGY LETTERS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Characteristics of spatial distribution of debris flow and the effect of their sediment yield in main downstream of Jinsha River, China

(2009) Hongjiang Liu et al.   Environmental Earth Sciences

Metals, minerals and microbes: geomicrobiology and bioremediation

(2009) G. M. Gadd   MICROBIOLOGY-SGM

Geochemistry of the headwaters of the Yangtze River, Tongtian He and Jinsha Jiang: Silicate weathering and CO2 consumption

(2008) Weihua Wu et al.   APPLIED GEOCHEMISTRY

Sulfate reduction and copper precipitation by a Citrobacter sp. isolated from a mining area

(2008) Rongliang Qiu et al.   JOURNAL OF HAZARDOUS MATERIALS

Trace metal behaviour in estuarine and riverine floodplain soils and sediments: A review

(2008) G. Du Laing et al.   SCIENCE OF THE TOTAL ENVIRONMENT