Deep sequencing analysis of transcriptomes in Aspergillus flavus in response to resveratrol

Comparative analysis of the silk gland transcriptomes between the domestic and wild silkworms

(2015) Shou-Min Fang et al.   BMC GENOMICS

Biological control of aflatoxin is effective and economical in Mississippi field trials

(2015) Mark A. Weaver et al.   CROP PROTECTION

Post-harvest management of aflatoxin contamination in groundnut

(2015) F. Waliyar et al.   World Mycotoxin Journal

Discovery and confirmation of genes/proteins associated with maize aflatoxin resistance

(2015) Z.-Y. Chen et al.   World Mycotoxin Journal

Challenges facing the biological control strategy for eliminating aflatoxin contamination

(2015) K.C. Ehrlich et al.   World Mycotoxin Journal

Atoxigenic Aspergillus flavus endemic to Italy for biocontrol of aflatoxins in maize

(2014) Antonio Mauro et al.   BIOCONTROL

Aspergillus parasiticus SU-1 Genome Sequence, Predicted Chromosome Structure, and Comparative Gene Expression under Aflatoxin-Inducing Conditions: Evidence that Differential Expression Contributes to Species Phenotype

(2014) John E. Linz et al.   EUKARYOTIC CELL

Review on pre- and post-harvest management of peanuts to minimize aflatoxin contamination

(2014) A.M. Torres et al.   FOOD RESEARCH INTERNATIONAL

Transcriptomic profiles of Aspergillus flavus CA42, a strain that produces small sclerotia, by decanal treatment and after recovery

(2014) Perng-Kuang Chang et al.   FUNGAL GENETICS AND BIOLOGY

Inhibition of Aflatoxin Synthesis in Aspergillus flavus by Three Structurally Modified Lentinans

(2014) Jinyou Ma et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

RNA-Seq-Based Transcriptome Analysis of Aflatoxigenic Aspergillus flavus in Response to Water Activity

(2014) Feng Zhang et al.   Toxins

Comparative transcriptome analysis of microsclerotia development in Nomuraea rileyi

(2013) Zhangyong Song et al.   BMC GENOMICS

Aflatoxins: Biosynthesis, Occurrence, Toxicity, and Remedies

(2013) Muhammad Abrar et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Transcriptomics in the RNA-seq era

(2013) Paul A McGettigan   CURRENT OPINION IN CHEMICAL BIOLOGY

Transcriptomic profiling of Aspergillus flavus in response to 5-azacytidine

(2013) Jian-Qing Lin et al.   FUNGAL GENETICS AND BIOLOGY

Genotypic and Phenotypic Versatility of Aspergillus flavus during Maize Exploitation

(2013) Massimo Reverberi et al.   PLoS One

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Aspergillus Oxylipin Signaling and Quorum Sensing Pathways Depend on G Protein-Coupled Receptors

(2012) Katharyn J. Affeldt et al.   Toxins

Aspergillus flavus

(2011) Saori Amaike et al.   Annual Review of Phytopathology

Tight control of mycotoxin biosynthesis gene expression in Aspergillus flavus by temperature as revealed by RNA-Seq

(2011) Jiujiang Yu et al.   FEMS MICROBIOLOGY LETTERS

Next-generation transcriptome assembly

(2011) Jeffrey A. Martin et al.   NATURE REVIEWS GENETICS

Expression Profiling of Non-Aflatoxigenic Aspergillus parasiticus Mutants Obtained by 5-Azacytosine Treatment or Serial Mycelial Transfer

(2011) Jeffrey R. Wilkinson et al.   Toxins

HypC, the Anthrone Oxidase Involved in Aflatoxin Biosynthesis

(2010) K. C. Ehrlich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of seed proteins associated with resistance to pre-harvested aflatoxin contamination in peanut (Arachis hypogaea L)

(2010) Tong Wang et al.   BMC PLANT BIOLOGY

SMURF: Genomic mapping of fungal secondary metabolite clusters

(2010) Nora Khaldi et al.   FUNGAL GENETICS AND BIOLOGY

What does genetic diversity of Aspergillus flavus tell us about Aspergillus oryzae?

(2010) Perng-Kuang Chang et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing

(2010) Bin Wang et al.   NUCLEIC ACIDS RESEARCH

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Multiple molecular targets of resveratrol: Anti-carcinogenic mechanisms

(2009) Mohammad Athar et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Deep sequencing of the zebrafish transcriptome response to mycobacterium infection

(2009) Zoltán Hegedűs et al.   MOLECULAR IMMUNOLOGY

Beyond aflatoxin: four distinct expression patterns and functional roles associated withAspergillus flavussecondary metabolism gene clusters

(2009) D. RYAN GEORGIANNA et al.   MOLECULAR PLANT PATHOLOGY

Transcriptome sequencing to detect gene fusions in cancer

(2009) Christopher A. Maher et al.   NATURE

Potential of Aspergillus flavus genomics for applications in biotechnology

(2009) Thomas E. Cleveland et al.   TRENDS IN BIOTECHNOLOGY

Predicted Roles of the Uncharacterized Clustered Genes in Aflatoxin Biosynthesis

(2009) Kenneth Ehrlich   Toxins

Morphological Transitions Governed by Density Dependence and Lipoxygenase Activity in Aspergillus flavus

(2008) S. Horowitz Brown et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diverse inhibitors of aflatoxin biosynthesis

(2008) Robert A. Holmes et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Requirement of LaeA for secondary metabolism and sclerotial production in Aspergillus flavus

(2008) Shubha P. Kale et al.   FUNGAL GENETICS AND BIOLOGY

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

(2008) Brian T. Wilhelm et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

VelB/VeA/LaeA Complex Coordinates Light Signal with Fungal Development and Secondary Metabolism

(2008) O. Bayram et al.   SCIENCE

Potential for metabolic engineering of resveratrol biosynthesis

(2008) Coralie Halls et al.   TRENDS IN BIOTECHNOLOGY

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

(2008) Natalie D. Fedorova et al.   PLoS Genetics