Fungal diversity in deep-sea sediments from Magellan seamounts environment of the western Pacific revealed by high-throughput Illumina sequencing

Fungal diversity of deep-sea sediments in Mid-Oceanic Ridge area of the East Pacific and the South Indian Oceans

(2020) Xixiang Tang et al.   BOTANICA MARINA

Factors influencing aquatic and terrestrial bacterial community assembly

(2019) Silke Langenheder et al.   Environmental Microbiology Reports

Fungal Community Composition and Potential Depth-Related Driving Factors Impacting Distribution Pattern and Trophic Modes from Epi- to Abyssopelagic Zones of the Western Pacific Ocean

(2019) Wei Li et al.   MICROBIAL ECOLOGY

Targeted ITS1 sequencing unravels the mycodiversity of deep‐sea sediments from the Gulf of Mexico

(2019) Lluvia Vargas‐Gastélum et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal diversity in deep-sea sediments of a hydrothermal vent system in the Southwest Indian Ridge

(2018) Wei Xu et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Cultivable Fungal Diversity in Deep-Sea Sediment of the East Pacific Ocean

(2018) Xu Wei et al.   GEOMICROBIOLOGY JOURNAL

Cassava foliage affects the microbial diversity of Chinese indigenous geese caecum using 16S rRNA sequencing

(2017) Mao Li et al.   Scientific Reports

Exploring fungal diversity in deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing

(2016) Xiao-Yong Zhang et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Global biogeography of marine fungi is shaped by the environment

(2016) Kaho H. Tisthammer et al.   Fungal Ecology

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Species Richness and Adaptation of Marine Fungi from Deep-Subseafloor Sediments

(2015) Vanessa Rédou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems

(2015) Jun Gong et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal Traits That Drive Ecosystem Dynamics on Land

(2015) Kathleen K. Treseder et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

De novo transcriptome assembly for rudimentary leaves in Litchi chinesis Sonn. and identification of differentially expressed genes in response to reactive oxygen species

(2014) Xingyu Lu et al.   BMC GENOMICS

Plant growth-promoting traits of epiphytic and endophytic yeasts isolated from rice and sugar cane leaves in Thailand

(2014) Pumin Nutaratat et al.   Fungal Biology

Nature of co-bearing ferromanganese crusts of the Magellan Seamounts (Pacific Ocean): Communication 1. Geology, mineralogy, and geochemistry

(2014) G. V. Novikov et al.   LITHOLOGY AND MINERAL RESOURCES

High Fungal Diversity and Abundance Recovered in the Deep-Sea Sediments of the Pacific Ocean

(2014) Wei Xu et al.   MICROBIAL ECOLOGY

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Diversity and biochemical features of culturable fungi from the coastal waters of Southern China

(2014) Li Li et al.   AMB Express

Age and formation conditions of the Co-rich manganese crust on guyots of the Magellan seamounts

(2013) M. E. Melnikov et al.   LITHOLOGY AND MINERAL RESOURCES

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Fungal diversity in deep-sea extreme environments

(2012) Yuriko Nagano et al.   Fungal Ecology

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

(2012) Hirokazu Toju et al.   PLoS One

Marine Fungi: Their Ecology and Molecular Diversity

(2011) Thomas A. Richards et al.   Annual Review of Marine Science

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments

(2011) Takahiko Nagahama et al.   ENVIRONMENTAL MICROBIOLOGY

Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing

(2011) Sébastien Monchy et al.   ENVIRONMENTAL MICROBIOLOGY

454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants

(2011) Tong Zhang et al.   ISME Journal

Comparative analysis between protist communities from the deep-sea pelagic ecosystem and specific deep hydrothermal habitats

(2010) Anne-Laure Sauvadet et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal diversity in deep-sea sediments – the presence of novel fungal groups

(2010) Yuriko Nagano et al.   Fungal Ecology

Rhizosphere disturbance influences fungal colonization and community development on dead fine roots

(2010) Melany C. Fisk et al.   PLANT AND SOIL

The Ecology of Seamounts: Structure, Function, and Human Impacts

(2009) Malcolm R. Clark et al.   Annual Review of Marine Science

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fungal Diversity in Deep-Sea Hydrothermal Ecosystems

(2009) T. Le Calvez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Antifungal secondary metabolites from endophytic Verticillium sp.

(2009) Fei You et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Diversity of culturable marine filamentous fungi from deep-sea hydrothermal vents

(2009) Gaëtan Burgaud et al.   ENVIRONMENTAL MICROBIOLOGY

Psychrophilic yeasts in glacial environments of Alpine glaciers

(2009) Benedetta Turchetti et al.   FEMS MICROBIOLOGY ECOLOGY

Fungal diversity in oxygen-depleted regions of  the Arabian Sea revealed by targeted environmental sequencing combined with cultivation

(2009) Cathrine S. Jebaraj et al.   FEMS MICROBIOLOGY ECOLOGY

Fungal Diversity Associated with an Active Deep Sea Volcano: Vailulu'u Seamount, Samoa

(2009) Laurie Connell et al.   GEOMICROBIOLOGY JOURNAL

Diversity of endophytic yeasts from sweet orange and their localization by scanning electron microscopy

(2009) Cláudia Santos Gai et al.   JOURNAL OF BASIC MICROBIOLOGY

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Determining species diversity of microfungal communities in forest tree roots by pure-culture isolation and DNA sequencing

(2008) Hanna Kwaśna et al.   APPLIED SOIL ECOLOGY

Evidence of Symbiosis Between the Soil Yeast Cryptococcus laurentii and a Sclerophyllous Medicinal Shrub, Agathosma betulina (Berg.) Pillans

(2008) Karen J. Cloete et al.   MICROBIAL ECOLOGY

Phylogeny and Ecophysiology of Opportunistic “Snow Molds” from a Subalpine Forest Ecosystem

(2008) S. K. Schmidt et al.   MICROBIAL ECOLOGY

Diversity of Soil Yeasts Isolated from South Victoria Land, Antarctica

(2008) L. Connell et al.   MICROBIAL ECOLOGY