Root pathogen diversity and composition varies with climate in undisturbed grasslands, but less so in anthropogenically disturbed grasslands

The global-scale distributions of soil protists and their contributions to belowground systems

(2020) Angela M. Oliverio et al.   Science Advances

Disturbance reduces the differentiation of mycorrhizal fungal communities in grasslands along a precipitation gradient

(2018) Geoffrey L. House et al.   ECOLOGICAL APPLICATIONS

Drought consistently alters the composition of soil fungal and bacterial communities in grasslands from two continents

(2018) Raúl Ochoa-Hueso et al.   GLOBAL CHANGE BIOLOGY

Probing the Phylogenomics and Putative Pathogenicity Genes of Pythium insidiosum by Oomycete Genome Analyses

(2018) Thidarat Rujirawat et al.   Scientific Reports

Frequency-dependent feedback constrains plant community coexistence

(2018) Maarten B. Eppinga et al.   Nature Ecology & Evolution

Phylogenetic relationships and spatial distributions of putative fungal pathogens of seedlings across a rainfall gradient in Panama

(2017) Erin R. Spear   Fungal Ecology

Oomycete Species Associated with Soybean Seedlings in North America—Part II: Diversity and Ecology in Relation to Environmental and Edaphic Factors

(2017) J. Alejandro Rojas et al.   PHYTOPATHOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Temperature mediates continental-scale diversity of microbes in forest soils

(2016) Jizhong Zhou et al.   Nature Communications

Oomycete-specific ITS primers for identification and metabarcoding

(2016) Taavi Riit et al.   MycoKeys

Maintenance of Plant Species Diversity by Pathogens

(2015) James D. Bever et al.   Annual Review of Ecology Evolution and Systematics

pez: phylogenetics for the environmental sciences

(2015) William D. Pearse et al.   BIOINFORMATICS

Compartmentalized and contrasted response of ectomycorrhizal and soil fungal communities of Scots pine forests along elevation gradients in France and Spain

(2015) Ana Rincón et al.   ENVIRONMENTAL MICROBIOLOGY

Soil fungal communities respond compositionally to recurring frequent prescribed burning in a managed southeastern US forest ecosystem

(2015) Alena K. Oliver et al.   FOREST ECOLOGY AND MANAGEMENT

Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites

(2015) Bruce C. Thomson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Precipitation modifies the effects of warming and nitrogen addition on soil microbial communities in northern Chinese grasslands

(2015) Naili Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Relationship between soil fungal diversity and temperature in the maritime Antarctic

(2015) Kevin K. Newsham et al.   Nature Climate Change

Multiscale patterns of arbuscular mycorrhizal fungal abundance and diversity in semiarid shrublands

(2014) V. Bala Chaudhary et al.   Fungal Ecology

Large-scale fungal diversity assessment in the Andean Yungas forests reveals strong community turnover among forest types along an altitudinal gradient

(2014) József Geml et al.   MOLECULAR ECOLOGY

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Plant-soil feedbacks: the past, the present and future challenges

(2013) Wim H. van der Putten et al.   JOURNAL OF ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Global warming and changes in drought

(2013) Kevin E. Trenberth et al.   Nature Climate Change

Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification

(2012) R. Henrik Nilsson et al.   Evolutionary Bioinformatics

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pathogen impacts on plant communities: unifying theory, concepts, and empirical work

(2011) Erin A. Mordecai   ECOLOGICAL MONOGRAPHS

Biogeographical patterns of soil molecular microbial biomass as influenced by soil characteristics and management

(2011) S. Dequiedt et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Effect of warming and drought on grassland microbial communities

(2011) Cody S Sheik et al.   ISME Journal

Fungal Community Composition in Neotropical Rain Forests: the Influence of Tree Diversity and Precipitation

(2011) Krista L. McGuire et al.   MICROBIAL ECOLOGY

DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer

(2011) GREGG P. ROBIDEAU et al.   Molecular Ecology Resources

Responses of terrestrial ecosystems to temperature and precipitation change: a meta-analysis of experimental manipulation

(2010) ZHUOTING WU et al.   GLOBAL CHANGE BIOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Negative plant–soil feedback predicts tree-species relative abundance in a tropical forest

(2010) Scott A. Mangan et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Asymmetric Density Dependence Shapes Species Abundances in a Tropical Tree Community

(2010) L. S. Comita et al.   SCIENCE

Global patterns in belowground communities

(2009) Noah Fierer et al.   ECOLOGY LETTERS

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY