Brain connections derived from diffusion MRI tractography can be highly anatomically accurate—if we know where white matter pathways start, where they end, and where they do not go

Tractostorm: The what, why, and how of tractography dissection reproducibility

(2020) Francois Rheault et al.   HUMAN BRAIN MAPPING

XTRACT - Standardised protocols for automated tractography in the human and macaque brain

(2020) Shaun Warrington et al.   NEUROIMAGE

Tractography and machine learning: Current state and open challenges

(2019) Philippe Poulin et al.   MAGNETIC RESONANCE IMAGING

Functional MRI and resting state connectivity in white matter - a mini-review

(2019) John C. Gore et al.   MAGNETIC RESONANCE IMAGING

Commentary: The Nomenclature of Human White Matter Association Pathways: Proposal for a Systematic Taxonomic Anatomical Classification

(2019) Sandip S. Panesar et al.   Frontiers in Neuroanatomy

A macaque connectome for large-scale network simulations in TheVirtualBrain

(2019) Kelly Shen et al.   Scientific Data

Validation of structural brain connectivity networks: The impact of scanning parameters

(2019) Karen S. Ambrosen et al.   NEUROIMAGE

White matter information flow mapping from diffusion MRI and EEG

(2019) Samuel Deslauriers-Gauthier et al.   NEUROIMAGE

MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

(2019) J-Donald Tournier et al.   NEUROIMAGE

Combined tract segmentation and orientation mapping for bundle-specific tractography

(2019) Jakob Wasserthal et al.   MEDICAL IMAGE ANALYSIS

When tractography meets tracer injections: a systematic study of trends and variation sources of diffusion-based connectivity

(2018) Dogu Baran Aydogan et al.   Brain Structure & Function

Functional segmentation of the anterior limb of the internal capsule: linking white matter abnormalities to specific connections.

(2018) Ziad Safadi et al.   JOURNAL OF NEUROSCIENCE

Joint Estimation of Effective Brain Wave Activation Modes Using EEG/MEG Sensor Arrays and Multimodal MRI Volumes

(2018) Vitaly L. Galinsky et al.   NEURAL COMPUTATION

Surface-enhanced tractography (SET)

(2018) Etienne St-Onge et al.   NEUROIMAGE

Recognition of white matter bundles using local and global streamline-based registration and clustering

(2018) Eleftherios Garyfallidis et al.   NEUROIMAGE

An anatomically curated fiber clustering white matter atlas for consistent white matter tract parcellation across the lifespan

(2018) Fan Zhang et al.   NEUROIMAGE

Validation strategies for the interpretation of microstructure imaging using diffusion MRI

(2018) Tim B. Dyrby et al.   NEUROIMAGE

Photogrammetry of the Human Brain: A Novel Method for Three-Dimensional Quantitative Exploration of the Structural Connectivity in Neurosurgery and Neurosciences

(2018) Alessandro De Benedictis et al.   World Neurosurgery

Voxel-wise detection of functional networks in white matter

(2018) Yali Huang et al.   NEUROIMAGE

TractSeg - Fast and accurate white matter tract segmentation

(2018) Jakob Wasserthal et al.   NEUROIMAGE

Anatomical accuracy of standard-practice tractography algorithms in the motor system - A histological validation in the squirrel monkey brain

(2018) Kurt G. Schilling et al.   MAGNETIC RESONANCE IMAGING

Limits to anatomical accuracy of diffusion tractography using modern approaches

(2018) Kurt G. Schilling et al.   NEUROIMAGE

The Nomenclature of Human White Matter Association Pathways: Proposal for a Systematic Taxonomic Anatomical Classification

(2018) Emmanuel Mandonnet et al.   Frontiers in Neuroanatomy

Bundle-specific tractography with incorporated anatomical and orientational priors

(2018) Francois Rheault et al.   NEUROIMAGE

AxTract: Toward microstructure informed tractography

(2017) Gabriel Girard et al.   HUMAN BRAIN MAPPING

Confirmation of a gyral bias in diffusion MRI fiber tractography

(2017) Kurt Schilling et al.   HUMAN BRAIN MAPPING

A Unified Theory of Neuro-MRI Data Shows Scale-Free Nature of Connectivity Modes

(2017) Vitaly L. Galinsky et al.   NEURAL COMPUTATION

Detection of synchronous brain activity in white matter tracts at rest and under functional loading

(2017) Zhaohua Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The challenge of mapping the human connectome based on diffusion tractography

(2017) Klaus H. Maier-Hein et al.   Nature Communications

Revisiting the human uncinate fasciculus, its subcomponents and asymmetries with stem-based tractography and microdissection validation

(2016) Janice Hau et al.   Brain Structure & Function

The white matter query language: a novel approach for describing human white matter anatomy

(2016) Demian Wassermann et al.   Brain Structure & Function

Using Diffusion Tractography to Predict Cortical Connection Strength and Distance: A Quantitative Comparison with Tracers in the Monkey

(2016) Chad J. Donahue et al.   JOURNAL OF NEUROSCIENCE

Dynamic Multiscale Modes of Resting State Brain Activity Detected by Entropy Field Decomposition

(2016) Lawrence R. Frank et al.   NEURAL COMPUTATION

The extreme capsule fiber complex in humans and macaque monkeys: a comparative diffusion MRI tractography study

(2015) Rogier B. Mars et al.   Brain Structure & Function

Subcomponents and connectivity of the superior longitudinal fasciculus in the human brain

(2015) Xuhui Wang et al.   Brain Structure & Function

A Diffusion MRI Tractography Connectome of the Mouse Brain and Comparison with Neuronal Tracer Data

(2015) Evan Calabrese et al.   CEREBRAL CORTEX

Validation of High-Resolution Tractography AgainstIn VivoTracing in the Macaque Visual Cortex

(2015) Hojjatollah Azadbakht et al.   CEREBRAL CORTEX

Validation of tractography: Comparison with manganese tracing

(2015) Thomas R. Knösche et al.   HUMAN BRAIN MAPPING

Comparison of diffusion tractography and tract-tracing measures of connectivity strength in rhesus macaque connectome

(2015) Martijn P. van den Heuvel et al.   HUMAN BRAIN MAPPING

Simultaneous Multi-Scale Diffusion Estimation and Tractography Guided by Entropy Spectrum Pathways

(2015) Vitaly L. Galinsky et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

COMMIT: Convex Optimization Modeling for Microstructure Informed Tractography

(2015) Alessandro Daducci et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography

(2015) Colin Reveley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Connectivity reveals relationship of brain areas for reward-guided learning and decision making in human and monkey frontal cortex

(2015) Franz-Xaver Neubert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dipy, a library for the analysis of diffusion MRI data

(2015) Eleftherios Garyfallidis et al.   Frontiers in Neuroinformatics

Whole brain myelin mapping using T1- and T2-weighted MR imaging data

(2014) Marco Ganzetti et al.   Frontiers in Human Neuroscience

MRI-based myelin water imaging: A technical review

(2014) Eva Alonso-Ortiz et al.   MAGNETIC RESONANCE IN MEDICINE

Towards quantitative connectivity analysis: reducing tractography biases

(2014) Gabriel Girard et al.   NEUROIMAGE

Comparison of Human Ventral Frontal Cortex Areas for Cognitive Control and Language with Areas in Monkey Frontal Cortex

(2014) Franz-Xaver Neubert et al.   NEURON

Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited

(2014) Cibu Thomas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Human and Monkey Ventral Prefrontal Fibers Use the Same Organizational Principles to Reach Their Targets: Tracing versus Tractography

(2013) S. Jbabdi et al.   JOURNAL OF NEUROSCIENCE

The Organization of Dorsal Frontal Cortex in Humans and Macaques

(2013) J. Sallet et al.   JOURNAL OF NEUROSCIENCE

Fiberfox: Facilitating the creation of realistic white matter software phantoms

(2013) Peter F. Neher et al.   MAGNETIC RESONANCE IN MEDICINE

Tractometer: Towards validation of tractography pipelines

(2013) Marc-Alexandre Côté et al.   MEDICAL IMAGE ANALYSIS

The anatomy of fronto-occipital connections from early blunt dissections to contemporary tractography

(2012) Stephanie J. Forkel et al.   CORTEX

MRtrix: Diffusion tractography in crossing fiber regions

(2012) J-Donald Tournier et al.   INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY

Automatic fiber bundle segmentation in massive tractography datasets using a multi-subject bundle atlas

(2012) P. Guevara et al.   NEUROIMAGE

Anatomically-constrained tractography: Improved diffusion MRI streamlines tractography through effective use of anatomical information

(2012) Robert E. Smith et al.   NEUROIMAGE

SIFT: Spherical-deconvolution informed filtering of tractograms

(2012) Robert E. Smith et al.   NEUROIMAGE

Frontal terminations for the inferior fronto-occipital fascicle: anatomical dissection, DTI study and functional considerations on a multi-component bundle

(2011) Silvio Sarubbo et al.   Brain Structure & Function

Connectivity-Based Subdivisions of the Human Right "Temporoparietal Junction Area": Evidence for Different Areas Participating in Different Cortical Networks

(2011) R. B. Mars et al.   CEREBRAL CORTEX

Diffusion-Weighted Imaging Tractography-Based Parcellation of the Human Parietal Cortex and Comparison with Human and Macaque Resting-State Functional Connectivity

(2011) R. B. Mars et al.   JOURNAL OF NEUROSCIENCE

Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy

(2011) Anastasia Yendiki   Frontiers in Neuroinformatics

Resolving crossing fibres using constrained spherical deconvolution: Validation using diffusion-weighted imaging phantom data

(2008) J.-Donald Tournier et al.   NEUROIMAGE

Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template

(2008) Susumu Mori et al.   NEUROIMAGE

Atlas-based segmentation of white matter tracts of the human brain using diffusion tensor tractography and comparison with classical dissection

(2007) I. Nigel C. Lawes et al.   NEUROIMAGE