A Diffusion MRI Tractography Connectome of the Mouse Brain and Comparison with Neuronal Tracer Data

Investigating the tradeoffs between spatial resolution and diffusion sampling for brain mapping with diffusion tractography: Time well spent?

(2014) Evan Calabrese et al.   HUMAN BRAIN MAPPING

Diffusion Tensor Imaging Reveals White Matter Injury in a Rat Model of Repetitive Blast-Induced Traumatic Brain Injury

(2014) Evan Calabrese et al.   JOURNAL OF NEUROTRAUMA

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited

(2014) Cibu Thomas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diffusion tensor tractography reveals disrupted structural connectivity in childhood absence epilepsy

(2013) Kaiqing Xue et al.   EPILEPSY RESEARCH

Diffusion tensor magnetic resonance histology reveals microstructural changes in the developing rat brain

(2013) Evan Calabrese et al.   NEUROIMAGE

A segmentation protocol and MRI atlas of the C57BL/6J mouse neocortex

(2013) Jeremy F.P. Ullmann et al.   NEUROIMAGE

Determination of the appropriatebvalue and number of gradient directions for high-angular-resolution diffusion-weighted imaging

(2013) J.-Donald Tournier et al.   NMR IN BIOMEDICINE

Mapping remodeling of thalamocortical projections in the living reeler mouse brain by diffusion tractography

(2013) L.-A. Harsan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A developmental ontology for the mammalian brain based on the prosomeric model

(2013) Luis Puelles et al.   TRENDS IN NEUROSCIENCES

Serial two-photon tomography for automated ex vivo mouse brain imaging

(2012) Timothy Ragan et al.   NATURE METHODS

A DTI tractography analysis of infralimbic and prelimbic connectivity in the mouse using high-throughput MRI

(2012) David A. Gutman et al.   NEUROIMAGE

A multidimensional magnetic resonance histology atlas of the Wistar rat brain

(2012) G. Allan Johnson et al.   NEUROIMAGE

Wanted dead or alive? The tradeoff between in-vivo versus ex-vivo MR brain imaging in the mouse

(2012) Jason P. Lerch et al.   Frontiers in Neuroinformatics

Extremely efficient and deterministic approach to generating optimal ordering of diffusion MRI measurements

(2011) Cheng Guan Koay et al.   MEDICAL PHYSICS

Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom

(2011) Pierre Fillard et al.   NEUROIMAGE

A simple scheme for generating nearly uniform distribution of antipodally symmetric points on the unit sphere

(2011) Cheng Guan Koay   Journal of Computational Science

High-Resolution Fiber Tract Reconstruction in the Human Brain by Means of Three-Dimensional Polarized Light Imaging

(2011) Markus Axer et al.   Frontiers in Neuroinformatics

Multiple-mouse Neuroanatomical Magnetic Resonance Imaging

(2011) Jun Dazai et al.   Jove-Journal of Visualized Experiments

Brain Connectivity Is Not Only Lower but Different in Schizophrenia: A Combined Anatomical and Functional Approach

(2010) Pawel Skudlarski et al.   BIOLOGICAL PSYCHIATRY

Is the ADHD brain wired differently? A review on structural and functional connectivity in attention deficit hyperactivity disorder

(2010) Kerstin Konrad et al.   HUMAN BRAIN MAPPING

An ex vivo imaging pipeline for producing high-quality and high-resolution diffusion-weighted imaging datasets

(2010) Tim B. Dyrby et al.   HUMAN BRAIN MAPPING

Generalized ${ q}$-Sampling Imaging

(2010) Fang-Cheng Yeh et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Diffusion Tensor Tractography Reveals Abnormal Topological Organization in Structural Cortical Networks in Alzheimer's Disease

(2010) C.-Y. Lo et al.   JOURNAL OF NEUROSCIENCE

Comparative mouse brain tractography of diffusion magnetic resonance imaging

(2010) Randal X. Moldrich et al.   NEUROIMAGE

Waxholm Space: An image-based reference for coordinating mouse brain research

(2010) G. Allan Johnson et al.   NEUROIMAGE

A reproducible evaluation of ANTs similarity metric performance in brain image registration

(2010) Brian B. Avants et al.   NEUROIMAGE

The human brain in numbers: a linearly scaled-up primate brain

(2009) Suzana Herculano-Houzel   Frontiers in Human Neuroscience

Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers

(2008) V.J. Wedeen et al.   NEUROIMAGE

Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy

(2007) Anjum A. Sharief et al.   NEUROIMAGE