Biomass-degrading glycoside hydrolases of archaeal origin

Novel Hyperthermophilic Crenarchaeon Thermofilum adornatum sp. nov. Uses GH1, GH3, and Two Novel Glycosidases for Cellulose Hydrolysis

(2020) Kseniya S. Zayulina et al.   Frontiers in Microbiology

The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics

(2020) Stefan Schulze et al.   Nature Communications

Preparation of malto-oligosaccharides with specific degree of polymerization by a novel cyclodextrinase from Palaeococcus pacificus

(2019) Hangyan Ji et al.   CARBOHYDRATE POLYMERS

l ‐Rhamnose catabolism in archaea

(2019) Andreas Reinhardt et al.   MOLECULAR MICROBIOLOGY

Enhanced ethanol production from industrial lignocellulose hydrolysates by a hydrolysate-cofermenting Saccharomyces cerevisiae strain

(2019) Shuangcheng Huang et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Effects of Random Mutagenesis and In Vivo Selection on the Specificity and Stability of a Thermozyme

(2019) Giuseppe Perugino et al.   Catalysts

Proposal of the reverse flow model for the origin of the eukaryotic cell based on comparative analyses of Asgard archaeal metabolism

(2019) Anja Spang et al.   Nature Microbiology

Co-production of 1,2,4-butantriol and ethanol from lignocellulose hydrolysates

(2019) Meilin Zhao et al.   BIORESOURCE TECHNOLOGY

Microbial diversity analysis and screening for novel xylanase enzymes from the sediment of the Lobios Hot Spring in Spain

(2019) Kamila Knapik et al.   Scientific Reports

Effect of physicochemical pretreatments plus enzymatic hydrolysis on the composition and morphologic structure of corn straw

(2019) Ping Wang et al.   RENEWABLE ENERGY

Characterization of an extremely thermo-active archaeal β-glucosidase and its activity towards glucan and mannan in concert with an endoglucanase

(2019) Carola Schröder et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Discovery of hyperstable carbohydrate‐active enzymes through metagenomics of extreme environments

(2019) Andrea Strazzulli et al.   FEBS Journal

A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)

(2019) Alexander Holm Viborg et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Saccharolobus caldissimus gen. nov., sp. nov., a facultatively anaerobic iron-reducing hyperthermophilic archaeon isolated from an acidic terrestrial hot spring, and reclassification of Sulfolobus solfataricus as Saccharolobus solfataricus comb. nov. and Sulfolobus shibatae as Saccharolobus shibatae comb. nov.

(2018) Hiroyuki D. Sakai et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Towards a sustainable biobased industry – Highlighting the impact of extremophiles

(2018) Anna Krüger et al.   New Biotechnology

Diversity and distribution of Archaea in global estuarine ecosystems

(2018) Xiaobo Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Abundance and distribution of Archaea in the subseafloor sedimentary biosphere

(2018) Tatsuhiko Hoshino et al.   ISME Journal

Expression and characterisation of a thermophilic endo-1,4-β-glucanase from Sulfolobus shibatae of potential industrial application

(2018) Angela Boyce et al.   MOLECULAR BIOLOGY REPORTS

Extremely thermoactive archaeal endoglucanase from a shallow marine hydrothermal vent from Vulcano Island

(2018) Marcel Suleiman et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island

(2017) Garabed Antranikian et al.   EXTREMOPHILES

The growing tree of Archaea: new perspectives on their diversity, evolution and ecology

(2017) Panagiotis S Adam et al.   ISME Journal

Bioinformatics for NGS-based metagenomics and the application to biogas research

(2017) Sebastian Jünemann et al.   JOURNAL OF BIOTECHNOLOGY

Extremozymes: A Potential Source for Industrial Applications

(2017) Kelly Dumorne; et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Dividing the Large Glycoside Hydrolase Family 43 into Subfamilies: a Motivation for Detailed Enzyme Characterization

(2016) Keith Mewis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of a thermostable glycoside hydrolase (CMbg0408) from the hyperthermophilic archaeonCaldivirga maquilingensisIC-167

(2016) Rebaone Letsididi et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

On the Origin of Heterotrophy

(2016) Peter Schönheit et al.   TRENDS IN MICROBIOLOGY

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

(2016) Daniel H. Huson et al.   PLoS Computational Biology

Isolation and Characterization of the First Xylanolytic Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1 and Its Unusual Multidomain Glycosidase

(2016) Sergey N. Gavrilov et al.   Frontiers in Microbiology

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone

(2016) Cristina N. Butterfield et al.   PeerJ

Optimized expression conditions for enhancing production of two recombinant chitinolytic enzymes from different prokaryote domains

(2015) Belén García-Fraga et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Exploration of extremophiles for high temperature biotechnological processes

(2015) Skander Elleuche et al.   CURRENT OPINION IN MICROBIOLOGY

Membrane-bound amylopullulanase is essential for starch metabolism of Sulfolobus acidocaldarius DSM639

(2015) Kyoung-Hwa Choi et al.   EXTREMOPHILES

Molecular cloning, characterization, and application of a novel thermostable α-glucosidase from the hyperthermophilic archaeon Pyrobaculum aerophilum strain IM2

(2015) Hyeyeon Jeon et al.   FOOD SCIENCE AND BIOTECHNOLOGY

Complex archaea that bridge the gap between prokaryotes and eukaryotes

(2015) Anja Spang et al.   NATURE

Methods for the directed evolution of proteins

(2015) Michael S. Packer et al.   NATURE REVIEWS GENETICS

Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data

(2015) Jake Jervis-Bardy et al.   Microbiome

Characterization of a heat-active archaeal β-glucosidase from a hydrothermal spring metagenome

(2014) Carola Schröder et al.   ENZYME AND MICROBIAL TECHNOLOGY

Carbohydrate Metabolism in Archaea: Current Insights into Unusual Enzymes and Pathways and Their Regulation

(2014) C. Brasen et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm

(2014) Yu-Wei Wu et al.   Microbiome

Novel Maltotriose-Hydrolyzing Thermoacidophilic Type III Pullulan Hydrolase from Thermococcus kodakarensis

(2013) Nasir Ahmad et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques

(2013) Inka Vanwonterghem et al.   CURRENT OPINION IN BIOTECHNOLOGY

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

(2012) Henrik Aspeborg et al.   BMC EVOLUTIONARY BIOLOGY

Palaeococcus pacificus sp. nov., an archaeon from deep-sea hydrothermal sediment

(2012) X. Zeng et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Characterization and application of an acidophilic and thermostable β-glucosidase from Thermofilum pendens

(2012) Dan Li et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Thermococcus kodakarensisas a Host for Gene Expression and Protein Secretion

(2011) Ryo Takemasa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biomass pretreatment: Fundamentals toward application

(2011) Valery B. Agbor et al.   BIOTECHNOLOGY ADVANCES

Second generation biofuels: Economics and policies

(2011) Miguel A. Carriquiry et al.   ENERGY POLICY

Development of an integrated thermal and enzymatic hydrolysis for lignocellulosic biomass in fixed-bed reactors

(2011) Christian Kirsch et al.   HOLZFORSCHUNG

Identification and characterization of a multidomain hyperthermophilic cellulase from an archaeal enrichment

(2011) Joel E. Graham et al.   Nature Communications

A novel family 9 β-1,3(4)-glucanase from thermoacidophilic Alicyclobacillus sp. A4 with potential applications in the brewing industry

(2010) Yingguo Bai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The molecular characterization of a novel GH38 α-mannosidase from the crenarchaeon Sulfolobus solfataricus revealed its ability in de-mannosylating glycoproteins

(2010) Beatrice Cobucci-Ponzano et al.   BIOCHIMIE

A study on chemical constituents and sugars extraction from spent coffee grounds

(2010) Solange I. Mussatto et al.   CARBOHYDRATE POLYMERS

Protein engineering of microbial enzymes

(2010) Dominique Böttcher et al.   CURRENT OPINION IN MICROBIOLOGY

The biorefinery concept: Using biomass instead of oil for producing energy and chemicals

(2010) Francesco Cherubini   ENERGY CONVERSION AND MANAGEMENT

Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries

(2010) Wei Xie et al.   ISME Journal

Overexpression and characterization of an extremely thermostable maltogenic amylase, with an optimal temperature of 100°C, from the hyperthermophilic archaeon Staphylothermus marinus

(2010) Dan Li et al.   New Biotechnology

Engineering the stability and the activity of a glycoside hydrolase

(2010) B. Cobucci-Ponzano et al.   PROTEIN ENGINEERING DESIGN & SELECTION

Continuous production of lactulose by immobilized thermostable β-glycosidase from Pyrococcus furiosus

(2009) J. Mayer et al.   JOURNAL OF BIOTECHNOLOGY

Structure of hyperthermophilic endocellulase fromPyrococcus horikoshii

(2009) Han-Woo Kim et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Production of first and second generation biofuels: A comprehensive review

(2009) S.N. Naik et al.   RENEWABLE & SUSTAINABLE ENERGY REVIEWS

Crystallization and preliminary X-ray analysis of endoglucanase fromPyrococcus horikoshii

(2008) Han-Woo Kim et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study

(2008) Marc Llirós et al.   FEMS MICROBIOLOGY ECOLOGY

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH

Cell proliferation at 122 C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation

(2008) K. Takai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA