Adaptation via pleiotropy and linkage: Association mapping reveals a complex genetic architecture within the stickleback Eda locus

Actors with Multiple Roles: Pleiotropic Enhancers and the Paradigm of Enhancer Modularity

(2019) Gonzalo Sabarís et al.   TRENDS IN GENETICS

Altering the Temporal Regulation of One Transcription Factor Drives Evolutionary Trade-Offs between Head Sensory Organs

(2019) Ariane Ramaekers et al.   DEVELOPMENTAL CELL

A global overview of pleiotropy and genetic architecture in complex traits

(2019) Kyoko Watanabe et al.   NATURE GENETICS

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry

(2019) James J. Lewis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Dissection of a Supergene ImplicatesTfap2ain Craniofacial Evolution of Threespine Sticklebacks

(2018) Priscilla A. Erickson et al.   GENETICS

Evolution of Darwin’s Peloric Gloxinia (Sinningia speciosa) Is Caused by a Null Mutation in a Pleiotropic TCP Gene

(2018) Yang Dong et al.   MOLECULAR BIOLOGY AND EVOLUTION

Wnt/β-catenin regulates an ancient signaling network during zebrafish scale development

(2018) Andrew J Aman et al.   eLife

Genetic Dissection of a Supergene ImplicatesTfap2ain Craniofacial Evolution of Threespine Sticklebacks

(2018) Priscilla A. Erickson et al.   GENETICS

Noemi Controls Production of Flavonoid Pigments and Fruit Acidity and Illustrates the Domestication Routes of Modern Citrus Varieties

(2018) Eugenio Butelli et al.   CURRENT BIOLOGY

Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change

(2018) Olga Nagy et al.   CURRENT BIOLOGY

Primula vulgaris (primrose) genome assembly, annotation and gene expression, with comparative genomics on the heterostyly supergene

(2018) Jonathan M. Cocker et al.   Scientific Reports

Detecting differential copy number variation between groups of samples

(2017) Craig B. Lowe et al.   GENOME RESEARCH

The ubiquity of pleiotropy in human disease

(2017) Kevin Chesmore et al.   HUMAN GENETICS

Sensory trait variation contributes to biased dispersal of threespine stickleback in flowing water

(2017) Y. Jiang et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Young inversion with multiple linked QTLs under selection in a hybrid zone

(2017) Cheng-Ruei Lee et al.   Nature Ecology & Evolution

Divergence and Functional Degradation of a Sex Chromosome-like Supergene

(2016) Elaina M. Tuttle et al.   CURRENT BIOLOGY

Evolution of Schooling Behavior in Threespine Sticklebacks Is Shaped by the Eda Gene

(2016) Anna K. Greenwood et al.   GENETICS

The genetic and molecular architecture of phenotypic diversity in sticklebacks

(2016) Catherine L. Peichel et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Recombination Rate Evolution and the Origin of Species

(2016) Daniel Ortiz-Barrientos et al.   TRENDS IN ECOLOGY & EVOLUTION

Evolutionary Novelty in a Butterfly Wing Pattern through Enhancer Shuffling

(2016) Richard W. R. Wallbank et al.   PLOS BIOLOGY

Evolution of Schooling Behavior in Threespine Sticklebacks Is Shaped by the Eda Gene

(2016) Anna K. Greenwood et al.   GENETICS

Dissection and Flat-mounting of the Threespine Stickleback Branchial Skeleton

(2016) Nicholas A. Ellis et al.   Jove-Journal of Visualized Experiments

Discriminating Selection on Lateral Plate Phenotype and Its Underlying Gene, Ectodysplasin, in Threespine Stickleback

(2015) Diana J. Rennison et al.   AMERICAN NATURALIST

Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)

(2015) Sangeet Lamichhaney et al.   NATURE GENETICS

A supergene determines highly divergent male reproductive morphs in the ruff

(2015) Clemens Küpper et al.   NATURE GENETICS

A recurrent regulatory change underlying altered expression and Wnt response of the stickleback armor plates gene EDA

(2015) Natasha M O'Brown et al.   eLife

Supergenes and Complex Phenotypes

(2014) Tanja Schwander et al.   CURRENT BIOLOGY

Development of the lateral line canal system through a bone remodeling process in zebrafish

(2014) Hironori Wada et al.   DEVELOPMENTAL BIOLOGY

Modular Skeletal Evolution in Sticklebacks Is Controlled by Additive and Clustered Quantitative Trait Loci

(2014) Craig T. Miller et al.   GENETICS

The extent and genetic basis of phenotypic divergence in life history traits inMimulus guttatus

(2014) Jannice Friedman et al.   MOLECULAR ECOLOGY

doublesex is a mimicry supergene

(2014) K. Kunte et al.   NATURE

Two developmentally temporal quantitative trait loci underlie convergent evolution of increased branchial bone length in sticklebacks

(2014) P. A. Erickson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Pleiotropic effects of a single gene on skeletal development and sensory system patterning in sticklebacks

(2014) Margaret G Mills et al.   EvoDevo

Fast Evolution from Precast Bricks: Genomics of Young Freshwater Populations of Threespine Stickleback Gasterosteus aculeatus

(2014) Nadezhda V. Terekhanova et al.   PLoS Genetics

ErbB expressing Schwann cells control lateral line progenitor cells via non-cell-autonomous regulation of Wnt/β-catenin

(2014) Mark E Lush et al.   eLife

Modeling Recent Human Evolution in Mice by Expression of a Selected EDAR Variant

(2013) Yana G. Kamberov et al.   CELL

Tight Genetic Linkage of Prezygotic Barrier Loci Creates a Multifunctional Speciation Island in Petunia

(2013) Katrin Hermann et al.   CURRENT BIOLOGY

Genetic and Neural Modularity Underlie the Evolution of Schooling Behavior in Threespine Sticklebacks

(2013) Anna K. Greenwood et al.   CURRENT BIOLOGY

CHROMOSOMAL REARRANGEMENTS AND THE GENETICS OF REPRODUCTIVE BARRIERS INMIMULUS(MONKEY FLOWERS)

(2013) Lila Fishman et al.   EVOLUTION

A Y-like social chromosome causes alternative colony organization in fire ants

(2013) John Wang et al.   NATURE

Innervation is required for sense organ development in the lateral line system of adult zebrafish

(2013) H. Wada et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptive Evolution of Multiple Traits Through Multiple Mutations at a Single Gene

(2013) C. R. Linnen et al.   SCIENCE

Genetic Architecture of Variation in the Lateral Line Sensory System of Threespine Sticklebacks

(2013) Abigail R. Wark et al.   G3-Genes Genomes Genetics

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Evolution of an adaptive behavior and its sensory receptors promotes eye regression in blind cavefish

(2012) Masato Yoshizawa et al.   BMC BIOLOGY

THE GENETIC BASIS OF A COMPLEX FUNCTIONAL SYSTEM

(2012) Nicholas F. Parnell et al.   EVOLUTION

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

THE QTN PROGRAM AND THE ALLELES THAT MATTER FOR EVOLUTION: ALL THAT'S GOLD DOES NOT GLITTER

(2011) Matthew V. Rockman   EVOLUTION

THE GENETIC ARCHITECTURE OF ADAPTATION UNDER MIGRATION-SELECTION BALANCE

(2011) Sam Yeaman et al.   EVOLUTION

Morphological evolution caused by many subtle-effect substitutions in regulatory DNA

(2011) Nicolás Frankel et al.   NATURE

Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry

(2011) Mathieu Joron et al.   NATURE

Molecular spandrels: tests of adaptation at the genetic level

(2011) Rowan D. H. Barrett et al.   NATURE REVIEWS GENETICS

Dermal morphogenesis controls lateral line patterning during postembryonic development of teleost fish

(2010) Hironori Wada et al.   DEVELOPMENTAL BIOLOGY

Multi-trait evolution in a cave fish, Astyanax mexicanus

(2010) Meredith Protas et al.   EVOLUTION & DEVELOPMENT

The possible role of environmental calcum levels during the evolution of phenotypic diversity in Outer Hebridean populations of the Three-spined stickleback, Gasterosteus aculeatus

(2010) N. Giles   JOURNAL OF ZOOLOGY

Genomic patterns of pleiotropy and the evolution of complexity

(2010) Z. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Widespread Chromosomal Inversion Polymorphism Contributes to a Major Life-History Transition, Local Adaptation, and Reproductive Isolation

(2010) David B. Lowry et al.   PLOS BIOLOGY

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

ENVIRONMENT SPECIFIC PLEIOTROPY FACILITATES DIVERGENCE AT THEECTODYSPLASINLOCUS IN THREESPINE STICKLEBACK

(2009) Rowan D. H. Barrett et al.   EVOLUTION

Lateral line diversity among ecologically divergent threespine stickleback populations

(2009) A. R. Wark et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Rapid ecological speciation in three-spined stickleback Gasterosteus aculeatus from Middleton Island, Alaska: the roles of selection and geographic isolation

(2009) O. Gelmond et al.   JOURNAL OF FISH BIOLOGY

Body armour and lateral-plate reduction in freshwater three-spined stickleback Gasterosteus aculeatus: adaptations to a different buoyancy regime?

(2009) F. Myhre et al.   JOURNAL OF FISH BIOLOGY

Stepwise Modification of a Modular Enhancer Underlies Adaptation in a Drosophila Population

(2009) M. Rebeiz et al.   SCIENCE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

(2008) Ary A. Hoffmann et al.   Annual Review of Ecology Evolution and Systematics

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

(2008) Sean B. Carroll   CELL

Reverse Evolution of Armor Plates in the Threespine Stickleback

(2008) Jun Kitano et al.   CURRENT BIOLOGY

THE LOCI OF EVOLUTION: HOW PREDICTABLE IS GENETIC EVOLUTION?

(2008) David L. Stern et al.   EVOLUTION

Pleiotropic scaling of gene effects and the ‘cost of complexity’

(2008) Günter P. Wagner et al.   NATURE

Natural Selection on a Major Armor Gene in Threespine Stickleback

(2008) R. D. H. Barrett et al.   SCIENCE

Zebrafish eda and edar Mutants Reveal Conserved and Ancestral Roles of Ectodysplasin Signaling in Vertebrates

(2008) Matthew P. Harris et al.   PLoS Genetics