Integrative Transcriptomic and Small RNA Sequencing Reveals Immune-Related miRNA–mRNA Regulation Network for Soybean Meal-Induced Enteritis in Hybrid Grouper, Epinephelus fuscoguttatus♀ × Epinephelus lanceolatus♂

Sodium butyrate supplementation in high-soybean meal diets for turbot (Scophthalmus maximus L.): Effects on inflammatory status, mucosal barriers and microbiota in the intestine

(2019) Yang Liu et al.   FISH & SHELLFISH IMMUNOLOGY

Mechanisms of natural killer cell‐mediated cellular cytotoxicity

(2019) Isabel Prager et al.   JOURNAL OF LEUKOCYTE BIOLOGY

Dynamics of MiRNA Transcriptome in Turbot (Scophthalmus maximus L.) Intestine Following Vibrio anguillarum Infection

(2019) Chengbin Gao et al.   MARINE BIOTECHNOLOGY

miRNA and mRNA Integration Network Construction Reveals Novel Key Regulators in Left-Sided and Right-Sided Colon Adenocarcinoma

(2019) Likun Yang et al.   Biomed Research International

miR-24 Is Elevated in Ulcerative Colitis Patients and Regulates Intestinal Epithelial Barrier Function

(2019) Artin Soroosh et al.   AMERICAN JOURNAL OF PATHOLOGY

Identification of potential biomarkers for soybean meal-induced enteritis in juvenile pearl gentian grouper, Epinephelus lanceolatus♂ × Epinephelus fuscoguttatus♀

(2019) Wei Zhang et al.   AQUACULTURE

Soybean Meal-Induced Intestinal Inflammation in Zebrafish Is T Cell-Dependent and Has a Th17 Cytokine Profile

(2019) Maximo Coronado et al.   Frontiers in Immunology

Resveratrol attenuates oxidative stress and inflammatory response in turbot fed with soybean meal based diet

(2019) Chang Tan et al.   FISH & SHELLFISH IMMUNOLOGY

Dietary Ginkgo biloba leaf extracts supplementation improved immunity and intestinal morphology, antioxidant ability and tight junction proteins mRNA expression of hybrid groupers (Epinephelus lanceolatus ♂ × Epinephelus fuscoguttatus ♀) fed high lipid diets

(2019) Xiaohong Tan et al.   FISH & SHELLFISH IMMUNOLOGY

Effects of dietary Senecio scandens buch-ham extracts on growth performance, plasma biochemical, histology and the expression of immune-related genes in hybrid grouper (Epinephelus lanceolatus♂ × Epinephelus fuscoguttatus♀)

(2019) Zhenzhu Sun et al.   FISH & SHELLFISH IMMUNOLOGY

The effect of partial replacement of fish meal by soy protein concentrate on growth performance, immune responses, gut morphology and intestinal inflammation for juvenile hybrid grouper (Epinephelus fuscoguttatus ♀ × Epinephelus lanceolatus ♂)

(2019) Junxian Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Anti-inflammatory effects of aloe vera on soy meal-induced intestinal inflammation in zebrafish

(2019) K. Fehrmann-Cartes et al.   FISH & SHELLFISH IMMUNOLOGY

Effects of dietary n-3 highly unsaturated fatty acids on growth, non-specific immunity, expression of some immune-related genes and resistance to Vibrio harveyi in hybrid grouper (♀ Epinephelus fuscoguttatus × ♂ Epinephelus lanceolatu)

(2019) Wenqiang An et al.   FISH & SHELLFISH IMMUNOLOGY

Dietary arginine affects growth, gut morphology, oxidation resistance and immunity of hybrid grouper (Epinephelus fuscoguttatus♀×Epinephelus lanceolatus♂) juveniles

(2018) Mingjuan Wu et al.   BRITISH JOURNAL OF NUTRITION

Soya-saponins induce intestinal inflammation and barrier dysfunction in juvenile turbot ( Scophthalmus maximus )

(2018) Min Gu et al.   FISH & SHELLFISH IMMUNOLOGY

Cottonseed protein concentrate (CPC) suppresses immune function in different intestinal segments of hybrid grouper ♀Epinephelus fuscoguttatus × ♂Epinephelus lanceolatu via TLR-2/MyD88 signaling pathways

(2018) Bin Yin et al.   FISH & SHELLFISH IMMUNOLOGY

Dietary soybean meal affects intestinal homoeostasis by altering the microbiota, morphology and inflammatory cytokine gene expression in northern snakehead

(2018) Shuyan Miao et al.   Scientific Reports

The protective role of glutamine on enteropathy induced by high dose of soybean meal in turbot, Scophthalmus maximus L.

(2018) Yang Liu et al.   AQUACULTURE

Integrative Transcriptomic and microRNAomic Profiling Reveals Immune Mechanism for the Resilience to Soybean Meal Stress in Fish Gut and Liver

(2018) Nan Wu et al.   Frontiers in Physiology

High throughput small RNA and transcriptome sequencing reveal capacitation-related microRNAs and mRNA in boar sperm

(2018) Yuan Li et al.   BMC GENOMICS

Protective effect of glutamine and arginine against soybean meal-induced enteritis in the juvenile turbot ( Scophthalmus maximus )

(2017) Min Gu et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome analysis of the spleen of the darkbarbel catfish Pelteobagrus vachellii in response to Aeromonas hydrophila infection

(2017) Chuanjie Qin et al.   FISH & SHELLFISH IMMUNOLOGY

Identification of Differentially Expressed Micrornas Associate with Glucose Metabolism in Different Organs of Blunt Snout Bream (Megalobrama amblycephala)

(2017) Ling-Hong Miao et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Macrophages in gastrointestinal homeostasis and inflammation

(2017) John R. Grainger et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

(2016) Elżbieta Król et al.   BMC GENOMICS

T cell immunity in the teleost digestive tract

(2016) Carolina Tafalla et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Transcriptome analysis of the Larimichthys crocea liver in response to Cryptocaryon irritans

(2016) Panpan Wang et al.   FISH & SHELLFISH IMMUNOLOGY

RNAi agents as chikungunya virus therapeutics

(2016) Deepti Parashar et al.   Future Virology

Intestinal Fluid Permeability in Atlantic Salmon (Salmo salar L.) Is Affected by Dietary Protein Source

(2016) Haibin Hu et al.   PLoS One

Effect of substitution of dietary fish meal by soybean meal on different sizes of gibel carp (Carassius auratus gibelio): digestive enzyme gene expressions and activities, and intestinal and hepatic histology

(2015) H. Liu et al.   AQUACULTURE NUTRITION

Nutrigenomic profiling of transcriptional processes affected in liver and distal intestine in response to a soybean meal-induced nutritional stress in Atlantic salmon (Salmo salar)

(2015) Christian De Santis et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Investigating the potential immune role of fish NCAMs: Molecular cloning and expression analysis in mandarin fish

(2015) Nan Wu et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome analysis revealed changes of multiple genes involved in immunity in Cynoglossus semilaevis during Vibrio anguillarum infection

(2015) Xiang Zhang et al.   FISH & SHELLFISH IMMUNOLOGY

MicroRNA-124 Regulates STAT3 Expression and Is Down-regulated in Colon Tissues of Pediatric Patients With Ulcerative Colitis

(2013) Georgios Koukos et al.   GASTROENTEROLOGY

Dietary soyasaponin supplementation to pea protein concentrate reveals nutrigenomic interactions underlying enteropathy in Atlantic salmon (Salmo salar)

(2012) Trond M Kortner et al.   BMC Veterinary Research

Early response of gene expression in the distal intestine of Atlantic salmon (Salmo salar L.) during the development of soybean meal induced enteritis

(2012) Christian Sahlmann et al.   FISH & SHELLFISH IMMUNOLOGY

Proteome Analysis of Pyloric Ceca: A Methodology for Fish Feed Development?

(2012) Tune Wulff et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Epithelial cell microRNAs in gut immunity

(2011) Yoshiyuki Goto et al.   NATURE IMMUNOLOGY

Epithelial microRNAs regulate gut mucosal immunity via epithelium–T cell crosstalk

(2011) Moshe Biton et al.   NATURE IMMUNOLOGY

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

Integrated Profiling of MicroRNAs and mRNAs: MicroRNAs Located on Xq27.3 Associate with Clear Cell Renal Cell Carcinoma

(2011) Liang Zhou et al.   PLoS One

MicroRNAs Control Intestinal Epithelial Differentiation, Architecture, and Barrier Function

(2010) Lindsay B. McKenna et al.   GASTROENTEROLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

MicroRNA-7 Modulates CD98 Expression during Intestinal Epithelial Cell Differentiation

(2009) Hang Thi Thu Nguyen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Overlapping expression of microRNAs in human embryonic colon and colorectal cancer

(2008) Mariano Monzo et al.   CELL RESEARCH