An updated genetic marker for detection of Lake Sinai Virus and metagenetic applications

Relative abundance and molecular evolution of Lake Sinai Virus (Sinaivirus) clades

(2019) Robert S. Cornman   PeerJ

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The discovery of Halictivirus resolves the Sinaivirus phylogeny

(2017) Diane Bigot et al.   JOURNAL OF GENERAL VIROLOGY

Honey bee (Apis mellifera) colony health and pathogen composition in migratory beekeeping operations involved in California almond pollination

(2017) William Glenny et al.   PLoS One

Multiyear survey targeting disease incidence in US honey bees

(2016) Kirsten S. Traynor et al.   APIDOLOGIE

Varroa destructor Macula-like virus, Lake Sinai virus and other new RNA viruses in wild bumblebee hosts ( Bombus pascuorum , Bombus lapidarius and Bombus pratorum )

(2016) Laurian Parmentier et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Honey Bee Viruses in Wild Bees: Viral Prevalence, Loads, and Experimental Inoculation

(2016) Adam G. Dolezal et al.   PLoS One

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Pathogen prevalence and abundance in honey bee colonies involved in almond pollination

(2015) Ian Cavigli et al.   APIDOLOGIE

Genome sequence heterogeneity of Lake Sinai Virus found in honey bees and Orf1/RdRP-based polymorphisms in a single host

(2015) Jorgen Ravoet et al.   VIRUS RESEARCH

Honey Bee Infecting Lake Sinai Viruses

(2015) Katie Daughenbaugh et al.   Viruses-Basel

Hologenome theory and the honey bee pathosphere

(2015) Ryan S Schwarz et al.   Current Opinion in Insect Science

Taxonomic Characterization of Honey Bee (Apis mellifera) Pollen Foraging Based on Non-Overlapping Paired-End Sequencing of Nuclear Ribosomal Loci

(2015) R. Scott Cornman et al.   PLoS One

The damage threshold hypothesis and the immune strategies of insects

(2014) Miguel Moreno-García et al.   INFECTION GENETICS AND EVOLUTION

Widespread occurrence of honey bee pathogens in solitary bees

(2014) Jorgen Ravoet et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Viral Quasispecies Evolution

(2012) E. Domingo et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Pathogen Webs in Collapsing Honey Bee Colonies

(2012) R. Scott Cornman et al.   PLoS One

Temporal Analysis of the Honey Bee Microbiome Reveals Four Novel Viruses and Seasonal Prevalence of Known Viruses, Nosema, and Crithidia

(2011) Charles Runckel et al.   PLoS One

Convergent host–parasite codon usage between honeybee and bee associated viral genomes

(2008) Panuwan Chantawannakul et al.   JOURNAL OF INVERTEBRATE PATHOLOGY