Natural variation in meiotic recombination rate shapes introgression patterns in intraspecific hybrids between wild and domesticated barley

Interacting genomic landscapes of REC8-cohesin, chromatin and meiotic recombination in Arabidopsis thaliana

(2020) Christophe Lambing et al.   PLANT CELL

Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics

(2020) Wen-Biao Jiao et al.   Nature Communications

Genetic differentiation and intrinsic genomic features explain variation in recombination hotspots among cocoa tree populations

(2020) Enrique J. Schwarzkopf et al.   BMC GENOMICS

Natural Selection Shapes Variation in Genome-wide Recombination Rate in Drosophila pseudoobscura

(2020) Kieran Samuk et al.   CURRENT BIOLOGY

Recombination rate variation shapes barriers to introgression across butterfly genomes

(2019) Simon H. Martin et al.   PLOS BIOLOGY

Dynamic reorganization of the genome shapes the recombination landscape in meiotic prophase

(2019) Lucas Patel et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Meiotic recombination within plant centromeres

(2019) Joiselle B Fernandes et al.   CURRENT OPINION IN PLANT BIOLOGY

Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome

(2019) Fei He et al.   NATURE GENETICS

Diversity and Determinants of Meiotic Recombination Landscapes

(2019) Mateusz Zelkowski et al.   TRENDS IN GENETICS

Variation in Recombination Rate Is Shaped by Domestication and Environmental Conditions in Barley

(2019) Steven Dreissig et al.   MOLECULAR BIOLOGY AND EVOLUTION

Meiotic DNA Repair in the Nucleolus Employs a Non-homologous End Joining Mechanism

(2019) Jason Sims et al.   PLANT CELL

An Ultra High-Density Arabidopsis thaliana Crossover Map That Refines the Influences of Structural Variation and Epigenetic Features

(2019) Beth A. Rowan et al.   GENETICS

Detecting Large Chromosomal Modifications Using Short Read Data From Genotyping-by-Sequencing

(2019) Jens Keilwagen et al.   Frontiers in Plant Science

Principles of meiotic chromosome assembly revealed in S. cerevisiae

(2019) Stephanie A. Schalbetter et al.   Nature Communications

Assessing by Modeling the Consequences of Increased Recombination in Recurrent Selection of Oryza sativa and Brassica rapa

(2019) Elise Tourrette et al.   G3-Genes Genomes Genetics

Molecular Evolution at a Meiosis Gene Mediates Species Differences in the Rate and Patterning of Recombination

(2018) Cara L. Brand et al.   CURRENT BIOLOGY

Plasticity of Meiotic Recombination Rates in Response to Temperature inArabidopsis

(2018) Andrew Lloyd et al.   GENETICS

Nucleosomes and DNA methylation shape meiotic DSB frequency inArabidopsis thalianatransposons and gene regulatory regions

(2018) Kyuha Choi et al.   GENOME RESEARCH

Epigenetic activation of meiotic recombination nearArabidopsis thalianacentromeres via loss of H3K9me2 and non-CG DNA methylation

(2018) Charles J. Underwood et al.   GENOME RESEARCH

Meta-analysis of chromosome-scale crossover rate variation in eukaryotes and its significance to evolutionary genomics

(2018) Quiterie Haenel et al.   MOLECULAR ECOLOGY

The genetic architecture of genome-wide recombination rate variation in allopolyploid wheat revealed by nested association mapping

(2018) Katherine W. Jordan et al.   PLANT JOURNAL

Massive crossover elevation via combination ofHEI10andrecq4a recq4bduringArabidopsismeiosis

(2018) Heïdi Serra et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural selection interacts with recombination to shape the evolution of hybrid genomes

(2018) Molly Schumer et al.   SCIENCE

High-resolution crossover mapping reveals similarities and differences of male and female recombination in maize

(2018) Penny M. A. Kianian et al.   Nature Communications

A Genomic Region Containing REC8 and RNF212B Is Associated with Individual Recombination Rate Variation in a Wild Population of Red Deer ( Cervus elaphus )

(2018) Susan E. Johnston et al.   G3-Genes Genomes Genetics

Plasticity of Meiotic Recombination Rates in Response to Temperature inArabidopsis

(2018) Andrew Lloyd et al.   GENETICS

Local Inversion Heterozygosity Alters Recombination throughout the Genome

(2018) K. Nicole Crown et al.   CURRENT BIOLOGY

Ensembl 2019

(2018) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

Natural variation and dosage of the HEI10 meiotic E3 ligase controlArabidopsiscrossover recombination

(2017) Piotr A. Ziolkowski et al.   GENES & DEVELOPMENT

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

(2017) Benoit Darrier et al.   GENETICS

Untimely expression of gametogenic genes in vegetative cells causes uniparental disomy

(2017) H. Diego Folco et al.   NATURE

A chromosome conformation capture ordered sequence of the barley genome

(2017) Martin Mascher et al.   NATURE

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics

(2017) Michiel Van Bel et al.   NUCLEIC ACIDS RESEARCH

Variation in recombination frequency and distribution across eukaryotes: patterns and processes

(2017) Jessica Stapley et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Development and Evaluation of a Barley 50k iSelect SNP Array

(2017) Micha M. Bayer et al.   Frontiers in Plant Science

Sequencing of Single Pollen Nuclei Reveals Meiotic Recombination Events at Megabase Resolution and Circumvents Segregation Distortion Caused by Postmeiotic Processes

(2017) Steven Dreissig et al.   Frontiers in Plant Science

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

(2017) Benoit Darrier et al.   GENETICS

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

(2017) Sebastian Beier et al.   Scientific Data

Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay Sheep ( Ovis aries )

(2016) Susan E. Johnston et al.   GENETICS

The Genetic Cost of Neanderthal Introgression

(2016) Kelley Harris et al.   GENETICS

Borrowed alleles and convergence in serpentine adaptation

(2016) Brian J. Arnold et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PGP repository: a plant phenomics and genomics data publication infrastructure

(2016) Daniel Arend et al.   Database-The Journal of Biological Databases and Curation

The Strength of Selection against Neanderthal Introgression

(2016) Ivan Juric et al.   PLoS Genetics

Conserved Genetic Architecture Underlying Individual Recombination Rate Variation in a Wild Population of Soay Sheep ( Ovis aries )

(2016) Susan E. Johnston et al.   GENETICS

The Genetic Cost of Neanderthal Introgression

(2016) Kelley Harris et al.   GENETICS

The Molecular Biology of Meiosis in Plants

(2015) Raphaël Mercier et al.   Annual Review of Plant Biology

How reticulated are species?

(2015) James Mallet et al.   BIOESSAYS

Modelling the genetic architecture of flowering time control in barley through nested association mapping

(2015) Andreas Maurer et al.   BMC GENOMICS

BARLEX – the Barley Draft Genome Explorer

(2015) Christian Colmsee et al.   Molecular Plant

Evolution of Darwin’s finches and their beaks revealed by genome sequencing

(2015) Sangeet Lamichhaney et al.   NATURE

The effect of temperature on the male and female recombination landscape of barley

(2015) Dylan Phillips et al.   NEW PHYTOLOGIST

Epigenetic control of meiotic recombination in plants

(2015) Natasha Yelina et al.   Science China-Life Sciences

Transcription dynamically patterns the meiotic chromosome-axis interface

(2015) Xiaoji Sun et al.   eLife

Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis

(2015) Piotr A Ziolkowski et al.   eLife

e!DAL - a framework to store, share and publish research data

(2014) Daniel Arend et al.   BMC BIOINFORMATICS

Meiotic recombination cold spots in chromosomal cohesion sites

(2014) Masaru Ito et al.   GENES TO CELLS

Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA

(2014) Emilia Huerta-Sánchez et al.   NATURE

Unlocking the secondary gene-pool of barley with next-generation sequencing

(2014) Neele Wendler et al.   PLANT BIOTECHNOLOGY JOURNAL

Mechanism and Regulation of Meiotic Recombination Initiation

(2014) Isabel Lam et al.   Cold Spring Harbor Perspectives in Biology

Crossover Patterning by the Beam-Film Model: Analysis and Implications

(2014) Liangran Zhang et al.   PLoS Genetics

pico-PLAZA, a genome database of microbial photosynthetic eukaryotes

(2013) Klaas Vandepoele et al.   ENVIRONMENTAL MICROBIOLOGY

Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters

(2013) Kyuha Choi et al.   NATURE GENETICS

Genome-wide Single-Cell Analysis of Recombination Activity and De Novo Mutation Rates in Human Sperm

(2012) Jianbin Wang et al.   CELL

Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

(2012) Kanchon K. Dasmahapatra et al.   NATURE

Comparative population genomics of maize domestication and improvement

(2012) Matthew B Hufford et al.   NATURE GENETICS

Spatiotemporal Asymmetry of the Meiotic Program Underlies the Predominantly Distal Distribution of Meiotic Crossovers in Barley

(2012) James D. Higgins et al.   PLANT CELL

Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis

(2012) C. Melamed-Bessudo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Loss of DNA methylation affects the recombination landscape in Arabidopsis

(2012) M. Mirouze et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenetic Remodeling of Meiotic Crossover Frequency in Arabidopsis thaliana DNA Methyltransferase Mutants

(2012) Nataliya E. Yelina et al.   PLoS Genetics

Genetic Variants in REC8, RNF212, and PRDM9 Influence Male Recombination in Cattle

(2012) Cynthia Sandor et al.   PLoS Genetics

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Rec8 Guides Canonical Spo11 Distribution along Yeast Meiotic Chromosomes

(2009) Kazuto Kugou et al.   MOLECULAR BIOLOGY OF THE CELL