Ciliate diversity and distribution across horizontal and vertical scales in the open ocean
Published 2020 View Full Article
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Title
Ciliate diversity and distribution across horizontal and vertical scales in the open ocean
Authors
Keywords
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Journal
MOLECULAR ECOLOGY
Volume 29, Issue 15, Pages 2824-2839
Publisher
Wiley
Online
2020-07-03
DOI
10.1111/mec.15528
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Note: Only part of the references are listed.- A metagenomic assessment of microbial eukaryotic diversity in the global ocean
- (2020) Aleix Obiol et al. Molecular Ecology Resources
- Disentangling the mechanisms shaping the surface ocean microbiota
- (2020) Ramiro Logares et al. Microbiome
- Seasonality of Planktonic Freshwater Ciliates: Are Analyses Based on V9 Regions of the 18S rRNA Gene Correlated With Morphospecies Counts?
- (2019) Gianna Pitsch et al. Frontiers in Microbiology
- Integrated Space-Time Dataset Reveals High Diversity and Distinct Community Structure of Ciliates in Mesopelagic Waters of the Northern South China Sea
- (2019) Ping Sun et al. Frontiers in Microbiology
- Global Trends in Marine Plankton Diversity across Kingdoms of Life
- (2019) Federico M. Ibarbalz et al. CELL
- Marked changes in diversity and relative activity of picoeukaryotes with depth in the world ocean
- (2019) Caterina R. Giner et al. ISME Journal
- Current practice in plankton metabarcoding: optimization and error management
- (2019) Luciana F Santoferrara JOURNAL OF PLANKTON RESEARCH
- Shifting metabolic priorities among key protistan taxa within and below the euphotic zone
- (2018) Sarah K. Hu et al. ENVIRONMENTAL MICROBIOLOGY
- EukRef-Ciliophora: a manually curated, phylogeny-based database of small subunit rRNA gene sequences of ciliates
- (2018) Vittorio Boscaro et al. ENVIRONMENTAL MICROBIOLOGY
- Global and local DNA (meta)barcoding reveal new biogeography patterns in tintinnid ciliates
- (2018) Luciana F Santoferrara et al. JOURNAL OF PLANKTON RESEARCH
- Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
- (2018) Sina M. Adl et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Quantifying long-term recurrence in planktonic microbial eukaryotes
- (2018) Caterina R. Giner et al. MOLECULAR ECOLOGY
- Diversity of free-living marine ciliates (Alveolata, Ciliophora): Faunal studies in coastal waters of China during the years 2011–2016
- (2017) Weiwei Liu et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- Motile behaviour of the free-living planktonic ciliate Zoothamnium pelagicum (Ciliophora, Peritrichia)
- (2017) Fernando Gómez EUROPEAN JOURNAL OF PROTISTOLOGY
- Patterns and Drivers of Vertical Distribution of the Ciliate Community from the Surface to the Abyssopelagic Zone in the Western Pacific Ocean
- (2017) Feng Zhao et al. Frontiers in Microbiology
- Marked seasonality and high spatial variation in estuarine ciliates are driven by exchanges between the ‘abundant’ and ‘intermediate’ biospheres
- (2017) Ping Sun et al. Scientific Reports
- Microbial eukaryote communities exhibit robust biogeographical patterns along a gradient of Patagonian and Antarctic lakes
- (2016) M. Romina Schiaffino et al. ENVIRONMENTAL MICROBIOLOGY
- Unexpected biodiversity of ciliates in marine samples from below the photic zone
- (2016) Jean-David Grattepanche et al. MOLECULAR ECOLOGY
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- The Tara Oceans voyage reveals global diversity and distribution patterns of marine planktonic ciliates
- (2016) Anna Gimmler et al. Scientific Reports
- Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing
- (2015) Ramon Massana et al. ENVIRONMENTAL MICROBIOLOGY
- Distinct assemblage of planktonic ciliates dominates both photic and deep waters on the New England shelf
- (2015) JD Grattepanche et al. MARINE ECOLOGY PROGRESS SERIES
- Eukaryotic plankton diversity in the sunlit ocean
- (2015) C. de Vargas et al. SCIENCE
- Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump
- (2015) S. Agusti et al. Nature Communications
- Genome of the facultative scuticociliatosis pathogen Pseudocohnilembus persalinus provides insight into its virulence through horizontal gene transfer
- (2015) Jie Xiong et al. Scientific Reports
- Distinct assemblage of planktonic ciliates dominates both photic and deep waters on the New England shelf
- (2015) JD Grattepanche et al. MARINE ECOLOGY PROGRESS SERIES
- Open science resources for the discovery and analysis of Tara Oceans data
- (2015) Stéphane Pesant et al. Scientific Data
- Latitudinal pattern of abundance and composition of ciliate communities in the surface waters of the Atlantic Ocean
- (2015) Krzysztof Rychert et al. OCEANOLOGICAL AND HYDROBIOLOGICAL STUDIES
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Pyrosequencing for assessing diversity of eukaryotic microbes: analysis of data on marine planktonic ciliates and comparison with traditional methods
- (2014) Luciana F. Santoferrara et al. ENVIRONMENTAL MICROBIOLOGY
- Ciliates in Extreme Environments
- (2014) Xiaozhong Hu JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection
- (2013) Alexandra Stock et al. BMC MICROBIOLOGY
- Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea
- (2013) Charles Bachy et al. FEMS MICROBIOLOGY ECOLOGY
- Bacterial production and losses to predators along an open ocean productivity gradient in the Subtropical North East Atlantic Ocean
- (2013) Dolors Vaqué et al. JOURNAL OF PLANKTON RESEARCH
- Choice of Pore Size Can Introduce Artefacts when Filtering Picoeukaryotes for Molecular Biodiversity Studies
- (2013) Nikolaj Sørensen et al. MICROBIAL ECOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Do microbes have macroecology? Large-scale patterns in the diversity and distribution of marine benthic ciliates
- (2012) Andrey Azovsky et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Biogeography of bacterial communities exposed to progressive long-term environmental change
- (2012) Ramiro Logares et al. ISME Journal
- The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
- (2012) Laure Guillou et al. NUCLEIC ACIDS RESEARCH
- Microbial eukaryote life in the new hypersaline deep-sea basin Thetis
- (2011) Alexandra Stock et al. EXTREMOPHILES
- Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments
- (2011) HOLLY M. BIK et al. MOLECULAR ECOLOGY
- Global Diversity of Aloricate Oligotrichea (Protista, Ciliophora, Spirotricha) in Marine and Brackish Sea Water
- (2011) Sabine Agatha PLoS One
- Molecular diversity and temporal variation of picoeukaryotes in two Arctic fjords, Svalbard
- (2011) N. Sørensen et al. POLAR BIOLOGY
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- (2010) Anne-Laure Sauvadet et al. ENVIRONMENTAL MICROBIOLOGY
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- Genetic diversity of picoeukaryotes in a semi-enclosed harbour in the subtropical western Pacific Ocean
- (2008) MK Cheung et al. AQUATIC MICROBIAL ECOLOGY
- Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin
- (2008) Eva Alexander et al. ENVIRONMENTAL MICROBIOLOGY
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