Murine Long Noncoding RNA Morrbid Contributes in the Regulation of NRAS Splicing in Hepatocytes In Vitro

Rapid quantification of cellular proliferation and migration using ImageJ

(2019) C Venter et al.   BIOTECHNIQUES

The lncRNA MIR4435-2HG is upregulated in hepatocellular carcinoma and promotes cancer cell proliferation by upregulating miRNA-487a

(2019) Qinglei Kong et al.   CELLULAR & MOLECULAR BIOLOGY LETTERS

Neuroblastoma RAS viral oncogene homolog mRNA is differentially spliced to give five distinct isoforms

(2019) Megan C. Duggan et al.   MELANOMA RESEARCH

The long noncoding RNA Morrbid regulates CD8 T cells in response to viral infection

(2019) Jonathan J. Kotzin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

(2019) Daehwan Kim et al.   NATURE BIOTECHNOLOGY

Long non-coding RNA CRNDE in cancer prognosis: Review and meta-analysis

(2018) Haibiao Xie et al.   CLINICA CHIMICA ACTA

Splicing regulation by long noncoding RNAs

(2018) Natali Romero-Barrios et al.   NUCLEIC ACIDS RESEARCH

Paraspeckles: Where Long Noncoding RNA Meets Phase Separation

(2018) Archa H. Fox et al.   TRENDS IN BIOCHEMICAL SCIENCES

Inhibition of Inflammatory Signaling in Tet2 Mutant Preleukemic Cells Mitigates Stress-Induced Abnormalities and Clonal Hematopoiesis

(2018) Zhigang Cai et al.   Cell Stem Cell

lncRNA in the liver: Prospects for fundamental research and therapy by RNA interference

(2016) Elena M. Smekalova et al.   BIOCHIMIE

Circulating long noncoding RNAs as novel biomarkers of human diseases

(2016) Xiaoying Jiang et al.   Biomarkers in Medicine

The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan

(2016) Jonathan J. Kotzin et al.   NATURE

The DBHS proteins SFPQ, NONO and PSPC1: a multipurpose molecular scaffold

(2016) Gavin J. Knott et al.   NUCLEIC ACIDS RESEARCH

Long Non-Coding RNAs as Master Regulators in Cardiovascular Diseases

(2015) Krystal Archer et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature

(2015) Inma Gonzalez et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Cellular localization of long non-coding RNAs affects silencing by RNAi more than by antisense oligonucleotides

(2015) Kim A. Lennox et al.   NUCLEIC ACIDS RESEARCH

Arginine methylation and citrullination of splicing factor proline- and glutamine-rich (SFPQ/PSF) regulates its association with mRNA

(2015) Ambrosius P. Snijders et al.   RNA

A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature

(2015) Inma Gonzalez et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Principles of Long Noncoding RNA Evolution Derived from Direct Comparison of Transcriptomes in 17 Species

(2015) Hadas Hezroni et al.   Cell Reports

PSF contacts exon 7 of SMN2 pre-mRNA to promote exon 7 inclusion

(2014) Sunghee Cho et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

svaseq: removing batch effects and other unwanted noise from sequencing data

(2014) Jeffrey T. Leek   NUCLEIC ACIDS RESEARCH

NRAS isoforms differentially affect downstream pathways, cell growth, and cell transformation

(2014) A.-K. Eisfeld et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Widespread splicing changes in human brain development and aging

(2013) P. Mazin et al.   Molecular Systems Biology

Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers

(2013) Alayne L Brunner et al.   GENOME BIOLOGY

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

An intronic ncRNA-dependent regulation of SORL1 expression affecting A  formation is upregulated in post-mortem Alzheimer's disease brain samples

(2012) E. Ciarlo et al.   Disease Models & Mechanisms

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Regulation of cytoplasmic mRNA decay

(2012) Daniel R. Schoenberg et al.   NATURE REVIEWS GENETICS

PSF Suppresses Tau Exon 10 Inclusion by Interacting with a Stem-Loop Structure Downstream of Exon 10

(2011) Payal Ray et al.   JOURNAL OF MOLECULAR NEUROSCIENCE

lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements

(2011) Chenguang Gong et al.   NATURE

Phosphorylation-Dependent Regulation of PSF by GSK3 Controls CD45 Alternative Splicing

(2010) Florian Heyd et al.   MOLECULAR CELL

The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

(2010) Vidisha Tripathi et al.   MOLECULAR CELL

Fox-3 and PSF interact to activate neural cell-specific alternative splicing

(2010) Kee K. Kim et al.   NUCLEIC ACIDS RESEARCH

hnRNP M interacts with PSF and p54nrb and co-localizes within defined nuclear structures

(2009) Marija Marko et al.   EXPERIMENTAL CELL RESEARCH

Regulation of proto-oncogene transcription, cell proliferation, and tumorigenesis in mice by PSF protein and a VL30 noncoding RNA

(2009) G. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans

(2009) Arun K Ramani et al.   GENOME BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Experimental validation of the importance of seed complement frequency to siRNA specificity

(2008) E. M. Anderson et al.   RNA