Allometric Trophic Networks From Individuals to Socio-Ecosystems: Consumer–Resource Theory of the Ecological Elephant in the Room

Mutualism increases diversity, stability, and function of multiplex networks that integrate pollinators into food webs

(2020) Kayla R. S. Hale et al.   Nature Communications

The role of fish life histories in allometrically scaled food‐web dynamics

(2019) Stephanie Bland et al.   Ecology and Evolution

The intrinsic predictability of ecological time series and its potential to guide forecasting

(2019) Frank Pennekamp et al.   ECOLOGICAL MONOGRAPHS

Ecogeographical rules and the macroecology of food webs

(2019) Benjamin Baiser et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Predator traits determine food-web architecture across ecosystems

(2019) Ulrich Brose et al.   Nature Ecology & Evolution

Opening the black box of plant nutrient uptake under warming predicts global patterns in community biomass and biological carbon storage

(2019) Jori M. Marx et al.   OIKOS

A Network Perspective for Community Assembly

(2019) Lauren C. Ponisio et al.   Frontiers in Ecology and Evolution

Principles of Ecology Revisited: Integrating Information and Ecological Theories for a More Unified Science

(2019) Mary I. O'Connor et al.   Frontiers in Ecology and Evolution

Interaction Dimensionality Scales Up to Generate Bimodal Consumer-Resource Size-Ratio Distributions in Ecological Communities

(2019) Samraat Pawar et al.   Frontiers in Ecology and Evolution

Predation risk influences food‐web structure by constraining species diet choice

(2019) Hsi‐Cheng Ho et al.   ECOLOGY LETTERS

Non-trophic interactions strengthen the diversity—functioning relationship in an ecological bioenergetic network model

(2019) Vincent Miele et al.   PLoS Computational Biology

Irrelevance of linear controllability to nonlinear dynamical networks

(2019) Junjie Jiang et al.   Nature Communications

Long-term cyclic persistence in an experimental predator–prey system

(2019) Bernd Blasius et al.   NATURE

Unveiling dimensions of stability in complex ecological networks

(2019) Virginia Domínguez-García et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simulated evolution assembles more realistic food webs with more functionally similar species than invasion

(2019) Tamara N. Romanuk et al.   Scientific Reports

Predictive power of food web models based on body size decreases with trophic complexity

(2018) Tomas Jonsson et al.   ECOLOGY LETTERS

How to quantify competitive ability

(2018) Simon P. Hart et al.   JOURNAL OF ECOLOGY

Metabolic adjustment enhances food web stability

(2018) Pierre Quévreux et al.   OIKOS

The biomass distribution on Earth

(2018) Yinon M. Bar-On et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accounting for activity respiration results in realistic trophic transfer efficiencies in allometric trophic network (ATN) models

(2018) Nadja J. Kath et al.   Theoretical Ecology

Energy Flux: The Link between Multitrophic Biodiversity and Ecosystem Functioning

(2018) Andrew D. Barnes et al.   TRENDS IN ECOLOGY & EVOLUTION

Fitting functional responses: Direct parameter estimation by simulating differential equations

(2018) Benjamin Rosenbaum et al.   Methods in Ecology and Evolution

Mechanisms influencing the coexistence of multiple consumers and multiple resources: resource and apparent competition

(2018) Mark A. McPeek   ECOLOGICAL MONOGRAPHS

Connectivity increases trophic subsidies in fragmented landscapes

(2018) Christine L. Hawn et al.   ECOLOGY LETTERS

Ecosystem function in predator-prey food webs-confronting dynamic models with empirical data

(2018) Alva Curtsdotter et al.   JOURNAL OF ANIMAL ECOLOGY

Bridging Scales: Allometric Random Walks Link Movement and Biodiversity Research

(2018) Myriam R. Hirt et al.   TRENDS IN ECOLOGY & EVOLUTION

Bringing Elton and Grinnell together: a quantitative framework to represent the biogeography of ecological interaction networks

(2018) Dominique Gravel et al.   ECOGRAPHY

An expanded modern coexistence theory for empirical applications

(2018) Stephen P. Ellner et al.   ECOLOGY LETTERS

Seeing the forest for the trees: Putting multilayer networks to work for community ecology

(2018) Matthew C. Hutchinson et al.   FUNCTIONAL ECOLOGY

Environmentally-induced noise dampens and reddens with increasing trophic level in a complex food web

(2018) Anna Kuparinen et al.   OIKOS

fluxweb : An R package to easily estimate energy fluxes in food webs

(2018) Benoit Gauzens et al.   Methods in Ecology and Evolution

Degree heterogeneity and stability of ecological networks

(2017) Gang Yan et al.   Journal of the Royal Society Interface

The fundamental advantages of temporal networks

(2017) A. Li et al.   SCIENCE

A general scaling law reveals why the largest animals are not the fastest

(2017) Myriam R. Hirt et al.   Nature Ecology & Evolution

The multilayer nature of ecological networks

(2017) Shai Pilosof et al.   Nature Ecology & Evolution

Predicting the consequences of species loss using size-structured biodiversity approaches

(2016) Ulrich Brose et al.   BIOLOGICAL REVIEWS

Niche partitioning due to adaptive foraging reverses effects of nestedness and connectance on pollination network stability

(2016) Fernanda S. Valdovinos et al.   ECOLOGY LETTERS

The use of DNA barcodes in food web construction—terrestrial and aquatic ecologists unite!

(2016) Tomas Roslin et al.   GENOME

Toward Community Standards and Software for Whole-Cell Modeling

(2016) Dagmar Waltemath et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

A new dimension: Evolutionary food web dynamics in two dimensional trait space

(2016) Daniel Ritterskamp et al.   JOURNAL OF THEORETICAL BIOLOGY

Universal resilience patterns in complex networks

(2016) Jianxi Gao et al.   NATURE

Biodiversity and ecosystem functioning in evolving food webs

(2016) K. T. Allhoff et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Belowground carbon trade among tall trees in a temperate forest

(2016) T. Klein et al.   SCIENCE

Trait selection during food web assembly: the roles of interactions and temperature

(2016) Isabelle Gounand et al.   Theoretical Ecology

Evolutionary food web models: effects of an additional resource

(2016) Daniel Ritterskamp et al.   Theoretical Ecology

Animal diversity and ecosystem functioning in dynamic food webs

(2016) Florian D. Schneider et al.   Nature Communications

Experimental evidence of pollination in marine flowers by invertebrate fauna

(2016) Brigitta I. van Tussenbroek et al.   Nature Communications

Anthropogenic effects are associated with a lower persistence of marine food webs

(2016) Luis J. Gilarranz et al.   Nature Communications

How Structured Is the Entangled Bank? The Surprisingly Simple Organization of Multiplex Ecological Networks Leads to Increased Persistence and Resilience

(2016) Sonia Kéfi et al.   PLOS BIOLOGY

The roles and impacts of human hunter-gatherers in North Pacific marine food webs

(2016) Jennifer A. Dunne et al.   Scientific Reports

Fishing-induced life-history changes degrade and destabilize harvested ecosystems

(2016) Anna Kuparinen et al.   Scientific Reports

Network structure beyond food webs: mapping non-trophic and trophic interactions on Chilean rocky shores

(2015) Sonia Kéfi et al.   ECOLOGY

The ecological forecast horizon, and examples of its uses and determinants

(2015) Owen L. Petchey et al.   ECOLOGY LETTERS

Interactive effects of warming, eutrophication and size structure: impacts on biodiversity and food-web structure

(2015) Amrei Binzer et al.   GLOBAL CHANGE BIOLOGY

Community assembly on isolated islands: macroecology meets evolution

(2015) A. J. Rominger et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes

(2015) Joshua S Weitz et al.   ISME Journal

On the interplay of speciation and dispersal: An evolutionary food web model in space

(2015) Korinna T. Allhoff et al.   JOURNAL OF THEORETICAL BIOLOGY

The quiet revolution of numerical weather prediction

(2015) Peter Bauer et al.   NATURE

The butterfly plant arms-race escalated by gene and genome duplications

(2015) Patrick P. Edger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic theory predicts whole-ecosystem properties

(2015) John R. Schramski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A general consumer-resource population model

(2015) K. D. Lafferty et al.   SCIENCE

Evolutionary food web model based on body masses gives realistic networks with permanent species turnover

(2015) K. T. Allhoff et al.   Scientific Reports

On Theory in Ecology

(2014) Pablo A. Marquet et al.   BIOSCIENCE

A newly discovered role of evolution in previously published consumer-resource dynamics

(2014) Teppo Hiltunen et al.   ECOLOGY LETTERS

Effects of trophic similarity on community composition

(2014) Hélène Morlon et al.   ECOLOGY LETTERS

An elegant chaos

(2014)   NATURE

Unravelling the complex structure of forest soil food webs: higher omnivory and more trophic levels

(2014) Christoph Digel et al.   OIKOS

Benchmarking Successional Progress in a Quantitative Food Web

(2014) Alice Boit et al.   PLoS One

Highly resolved early Eocene food webs show development of modern trophic structure after the end-Cretaceous extinction

(2014) J. A. Dunne et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ecological stability in response to warming

(2014) Katarina E. Fussmann et al.   Nature Climate Change

Trophic levels colonize sequentially but effects of habitat size and quality are transient

(2013) Denise A. Piechnik   ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY

Body masses, functional responses and predator-prey stability

(2013) Gregor Kalinkat et al.   ECOLOGY LETTERS

Metabolic ecology

(2013) Murray M. Humphries et al.   JOURNAL OF ANIMAL ECOLOGY

When do evolutionary food web models generate complex networks?

(2013) Korinna T. Allhoff et al.   JOURNAL OF THEORETICAL BIOLOGY

Food web modularity and biodiversity promote species persistence in polluted environments

(2013) Leslie Garay-Narváez et al.   OIKOS

The more polluted the environment, the more important biodiversity is for food web stability

(2013) Leslie Garay-Narváez et al.   OIKOS

A cure for the plague of parameters: constraining models of complex population dynamics with allometries

(2013) L. N. Hudson et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Predictive systems ecology

(2013) M. R. Evans et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Maximal feeding with active prey-switching: A kill-the-winner functional response and its effect on global diversity and biogeography

(2013) S.M. Vallina et al.   PROGRESS IN OCEANOGRAPHY

The ghost of nestedness in ecological networks

(2013) Phillip P. A. Staniczenko et al.   Nature Communications

Secondary extinctions in food webs: a Bayesian network approach

(2013) Anna Eklöf et al.   Methods in Ecology and Evolution

Parasites Affect Food Web Structure Primarily through Increased Diversity and Complexity

(2013) Jennifer A. Dunne et al.   PLOS BIOLOGY

Beyond the Plankton Ecology Group (PEG) Model: Mechanisms Driving Plankton Succession

(2012) Ulrich Sommer et al.   Annual Review of Ecology Evolution and Systematics

A Whole-Cell Computational Model Predicts Phenotype from Genotype

(2012) Jonathan R. Karr et al.   CELL

Mechanistic theory and modelling of complex food-web dynamics in Lake Constance

(2012) Alice Boit et al.   ECOLOGY LETTERS

Interactive effects of body-size structure and adaptive foraging on food-web stability

(2012) Lotta Heckmann et al.   ECOLOGY LETTERS

Testing the metabolic theory of ecology

(2012) Charles A. Price et al.   ECOLOGY LETTERS

More than a meal… integrating non-feeding interactions into food webs

(2012) Sonia Kéfi et al.   ECOLOGY LETTERS

Disentangling nestedness from models of ecological complexity

(2012) Alex James et al.   NATURE

Dimensionality of consumer search space drives trophic interaction strengths

(2012) Samraat Pawar et al.   NATURE

Approaching a state shift in Earth’s biosphere

(2012) Anthony D. Barnosky et al.   NATURE

Biodiversity loss and its impact on humanity

(2012) Bradley J. Cardinale et al.   NATURE

Adaptive foraging allows the maintenance of biodiversity of pollination networks

(2012) Fernanda S. Valdovinos et al.   OIKOS

Universal temperature and body-mass scaling of feeding rates

(2012) B. C. Rall et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Warming-induced reductions in body size are greater in aquatic than terrestrial species

(2012) J. Forster et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Conservation of Species' Roles in Food Webs

(2012) D. B. Stouffer et al.   SCIENCE

Food webs: reconciling the structure and function of biodiversity

(2012) Ross M. Thompson et al.   TRENDS IN ECOLOGY & EVOLUTION

Estimating trophic position in marine and estuarine food webs

(2012) W. Mather A. Carscallen et al.   Ecosphere

Extinctions in complex, size-structured communities

(2011) Ulrich Brose   BASIC AND APPLIED ECOLOGY

Moorea BIOCODE barcode library as a tool for understanding predator–prey interactions: insights into the diet of common predatory coral reef fishes

(2011) M. Leray et al.   CORAL REEFS

An all-taxon microbial inventory of the Moorea coral reef ecosystem

(2011) Elizabeth A McCliment et al.   ISME Journal

Warming effects on consumption and intraspecific interference competition depend on predator metabolism

(2011) Birgit Lang et al.   JOURNAL OF ANIMAL ECOLOGY

The role of body mass in diet contiguity and food-web structure

(2011) Daniel B. Stouffer et al.   JOURNAL OF ANIMAL ECOLOGY

Perspectives in Managing an Implant Recall: Revision of 94 Durom Metasul Acetabular Components

(2011) Vincent Y Ng et al.   JOURNAL OF BONE AND JOINT SURGERY-AMERICAN VOLUME

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

Controllability of complex networks

(2011) Yang-Yu Liu et al.   NATURE

The network takeover

(2011) Albert-László Barabási   Nature Physics

Body sizes, cumulative and allometric degree distributions across natural food webs

(2011) Christoph Digel et al.   OIKOS

Taxonomic versus allometric constraints on non-linear interaction strengths

(2011) Björn Christian Rall et al.   OIKOS

Predictive ecology: systems approaches

(2011) M. R. Evans et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Compartmentalization increases food-web persistence

(2011) Daniel B. Stouffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inferring the structure and dynamics of interactions in schooling fish

(2011) Y. Katz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Shrinking body size as an ecological response to climate change

(2011) Jennifer A. Sheridan et al.   Nature Climate Change

Source and sink dynamics in meta-ecosystems

(2010) Dominique Gravel et al.   ECOLOGY

A consumer–resource approach to the density-dependent population dynamics of mutualism

(2010) J. Nathaniel Holland et al.   ECOLOGY

Biomass transformation webs provide a unified approach to consumer-resource modelling

(2010) Wayne M. Getz   ECOLOGY LETTERS

Consequences of adaptive behaviour for the structure and dynamics of food webs

(2010) Fernanda S. Valdovinos et al.   ECOLOGY LETTERS

Body-mass constraints on foraging behaviour determine population and food-web dynamics

(2010) Ulrich Brose   FUNCTIONAL ECOLOGY

Warming up the system: higher predator feeding rates but lower energetic efficiencies

(2010) OLIVERA VUCIC-PESTIC et al.   GLOBAL CHANGE BIOLOGY

Relative importance of top-down and bottom-up forces in food webs of Sarracenia pitcher communities at a northern and a southern site

(2010) David Hoekman   OECOLOGIA

Predicting the effects of temperature on food web connectance

(2010) O. L. Petchey et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Probabilistic Niche Model Reveals the Niche Structure and Role of Body Size in a Complex Food Web

(2010) Richard J. Williams et al.   PLoS One

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks

(2010) E. Thebault et al.   SCIENCE

Consumer-resource theory predicts dynamic transitions between outcomes of interspecific interactions

(2009) J. Nathaniel Holland et al.   ECOLOGY LETTERS

Understanding food-web persistence from local to global scales

(2009) Daniel B. Stouffer et al.   ECOLOGY LETTERS

Temperature, predator-prey interaction strength and population stability

(2009) BJÖRN C. RALL et al.   GLOBAL CHANGE BIOLOGY

Allometric functional response model: body masses constrain interaction strengths

(2009) Olivera Vucic-Pestic et al.   JOURNAL OF ANIMAL ECOLOGY

Studies on the growth, structure and abundance of the Mediterranean spur-thighed tortoise, Tesudo graeca in field populations

(2009) M. R. K. Lambert   JOURNAL OF ZOOLOGY

Review: On the Origin of Species by Charles Darwin

(2009) Eleanor Harris   NEW SCIENTIST

Predicting invasion success in complex ecological networks

(2009) T. N. Romanuk et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Cascading extinctions and community collapse in model food webs

(2009) J. A. Dunne et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Linking biodiversity and ecosystems: towards a unifying ecological theory

(2009) M. Loreau   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Generalized Models Reveal Stabilizing Factors in Food Webs

(2009) T. Gross et al.   SCIENCE

Disentangling the Web of Life

(2009) Jordi Bascompte   SCIENCE

Simple MaxEnt models explain food web degree distributions

(2009) Richard J. Williams   Theoretical Ecology

Why allometric scaling enhances stability in food web models

(2009) Boris Kartascheff et al.   Theoretical Ecology

Larval Dispersal and Marine Population Connectivity

(2008) Robert K. Cowen et al.   Annual Review of Marine Science

MAXIMUM ENTROPY AND THE STATE-VARIABLE APPROACH TO MACROECOLOGY

(2008) J. Harte et al.   ECOLOGY

A landscape theory for food web architecture

(2008) Neil Rooney et al.   ECOLOGY LETTERS

Success and its limits among structural models of complex food webs

(2008) Richard J. Williams et al.   JOURNAL OF ANIMAL ECOLOGY

Foraging theory predicts predator-prey energy fluxes

(2008) U. Brose et al.   JOURNAL OF ANIMAL ECOLOGY

The interaction between predation and competition

(2008) Peter Chesson et al.   NATURE

Food-web assembly during a classic biogeographic study: species’ "trophic breadth" corresponds to colonization order

(2008) Denise A. Piechnik et al.   OIKOS

Size, foraging, and food web structure

(2008) O. L. Petchey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simple prediction of interaction strengths in complex food webs

(2008) E. L. Berlow et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complex food webs prevent competitive exclusion among producer species

(2008) U. Brose   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A General Model for Food Web Structure

(2008) S. Allesina et al.   SCIENCE

Effects of network and dynamical model structure on species persistence in large model food webs

(2008) Richard J. Williams   Theoretical Ecology

Compilation and Network Analyses of Cambrian Food Webs

(2008) Jennifer A Dunne et al.   PLOS BIOLOGY