Network-directed efficient isolation of previously uncultivated Chloroflexi and related bacteria in hot spring microbial mats
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Network-directed efficient isolation of previously uncultivated Chloroflexi and related bacteria in hot spring microbial mats
Authors
Keywords
-
Journal
npj Biofilms and Microbiomes
Volume 6, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-04-29
DOI
10.1038/s41522-020-0131-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Enhanced uptake of Cd by biofilm forming Cd resistant plant growth promoting bacteria bioaugmented to the rhizosphere of Vetiveria zizanioides
- (2019) Ankita Itusha et al. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION
- Marine biofilms constitute a bank of hidden microbial diversity and functional potential
- (2019) Weipeng Zhang et al. Nature Communications
- Bacteria and archaea on Earth and their abundance in biofilms
- (2019) Hans-Curt Flemming et al. NATURE REVIEWS MICROBIOLOGY
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
- (2019) Evan Bolyen et al. NATURE BIOTECHNOLOGY
- Go with the flow or solitary confinement: a look inside the single-cell toolbox for isolation of rare and uncultured microbes
- (2018) Geert RB Huys et al. CURRENT OPINION IN MICROBIOLOGY
- Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
- (2018) Jongsik Chun et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom
- (2018) Yuanyuan Xue et al. ISME Journal
- The social network of microorganisms — how auxotrophies shape complex communities
- (2018) Karsten Zengler et al. NATURE REVIEWS MICROBIOLOGY
- Growth of sedimentaryBathyarchaeotaon lignin as an energy source
- (2018) Tiantian Yu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Modifying and reacting to the environmental pH can drive bacterial interactions
- (2018) Christoph Ratzke et al. PLOS BIOLOGY
- Pantothenic Acid, Vitamin C, and Biotin Play Important Roles in the Growth of Lactobacillus helveticus
- (2018) Chunxiao Yao et al. Frontiers in Microbiology
- The contribution of culturomics to the repertoire of isolated human bacterial and archaeal species
- (2018) Melhem Bilen et al. Microbiome
- Isolation of Previously Uncultured Slow-Growing Bacteria by Using a Simple Modification in the Preparation of Agar Media
- (2018) Souichiro Kato et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Efficient production of 3-hydroxypropionate from fatty acids feedstock in Escherichia coli
- (2018) Bo Liu et al. METABOLIC ENGINEERING
- Siccirubricoccus deserti gen. nov., sp. nov., a proteobacterium isolated from a desert sample
- (2017) Zi-Wen Yang et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Degradation of hydrogen peroxide at the ocean’s surface: the influence of the microbial community on the realized thermal niche of Prochlorococcus
- (2017) Lanying Ma et al. ISME Journal
- The trajectory of microbial single-cell sequencing
- (2017) Tanja Woyke et al. NATURE METHODS
- In situ cultivation of previously uncultivable microorganisms using the ichip
- (2017) Brittany Berdy et al. Nature Protocols
- Enhancement of maize plant growth with inoculation of phosphate-solubilizing bacteria and biochar amendment in soil
- (2017) Mazhar Rafique et al. SOIL SCIENCE AND PLANT NUTRITION
- High-Throughput Single-Cell Cultivation on Microfluidic Streak Plates
- (2016) Cheng-Ying Jiang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial interactions and community assembly at microscales
- (2016) Otto X Cordero et al. CURRENT OPINION IN MICROBIOLOGY
- Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment
- (2016) Louie Wurch et al. Nature Communications
- The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. I. Microbial Diversity Based on 16S rRNA Gene Amplicons and Metagenomic Sequencing
- (2016) Vera Thiel et al. Frontiers in Microbiology
- Chelex 100 as a Medium for Simple Extraction of DNA for PCR-Based Typing from Forensic Material
- (2016) P. Sean Walsh et al. BIOTECHNIQUES
- Zincmethylphyrins and coproporphyrins, novel growth factors released by Sphingopyxis sp., enable laboratory cultivation of previously uncultured Leucobacter sp. through interspecies mutualism
- (2015) Mohammad Nazrul Islam Bhuiyan et al. JOURNAL OF ANTIBIOTICS
- Mining the microbial dark matter
- (2015) Corie Lok NATURE
- Structure, variation, and assembly of the root-associated microbiomes of rice
- (2015) Joseph Edwards et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
- (2015) Marcel Huntemann et al. Standards in Genomic Sciences
- Community quorum sensing signalling and quenching: microbial granular biofilm assembly
- (2015) Chuan Hao Tan et al. npj Biofilms and Microbiomes
- A Hidden Pitfall in the Preparation of Agar Media Undermines Microorganism Cultivability
- (2014) Tomohiro Tanaka et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
- (2014) M. Kim et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Effect of kynurenic acid on the viability of probiotics in vitro
- (2014) Jadwiga Dolecka et al. Pharmacological Reports
- Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions
- (2014) Jessica K. Cole et al. Frontiers in Microbiology
- The role of bacterial biofilms in chronic infections
- (2013) Thomas Bjarnsholt APMIS
- Formation of nitrogen-rich hot springs: Modeling physicochemical interactions in a water-granite system
- (2013) S. Kh. Pavlov et al. GEOCHEMISTRY INTERNATIONAL
- Chlamydomonas reinhardtii thermal tolerance enhancement mediated by a mutualistic interaction with vitamin B12-producing bacteria
- (2013) Bo Xie et al. ISME Journal
- Community Structure and Function of High-Temperature Chlorophototrophic Microbial Mats Inhabiting Diverse Geothermal Environments
- (2013) Christian G. Klatt et al. Frontiers in Microbiology
- Microbial interactions: from networks to models
- (2012) Karoline Faust et al. NATURE REVIEWS MICROBIOLOGY
- Trace Amounts of Furan-2-Carboxylic Acids Determine the Quality of Solid Agar Plates for Bacterial Culture
- (2012) Shintaro Hara et al. PLoS One
- Improving the culturability of freshwater bacteria using FW70, a low-nutrient solid medium amended with sodium pyruvate
- (2010) Iori Imazaki et al. CANADIAN JOURNAL OF MICROBIOLOGY
- Bacterial Community Composition of Stream Biofilms in Spatially Variable-Flow Environments
- (2009) K. Besemer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Differential Effects of Distinct Bacterial Biofilms in a Cave Environment
- (2009) Maria C. Portillo et al. CURRENT MICROBIOLOGY
- Effect of gelling agent on colony formation in solid cultivation of microbial community in lake sediment
- (2009) Hideyuki Tamaki et al. ENVIRONMENTAL MICROBIOLOGY
- Cultivating previously uncultured soil bacteria using a soil substrate membrane system
- (2008) Belinda C Ferrari et al. Nature Protocols
- The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains
- (2008) Pablo Yarza et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation