Continental-Scale Microbiome Study Reveals Different Environmental Characteristics Determining Microbial Richness, Composition, and Quantity in Hotel Rooms

Where and at which scales does the latitudinal diversity gradient fail?

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Current understanding of the human microbiome

(2018) Jack A Gilbert et al.   NATURE MEDICINE

Best practices for analysing microbiomes

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The human skin microbiome

(2018) Allyson L. Byrd et al.   NATURE REVIEWS MICROBIOLOGY

Embracing microbes in exposure science

(2018) William W Nazaroff   Journal of Exposure Science and Environmental Epidemiology

Longitudinal development of the dust microbiome in a newly opened Norwegian kindergarten

(2018) Anders B. Nygaard et al.   Microbiome

Identifying and Predicting Novelty in Microbiome Studies

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Quantitative microbiome profiling links gut community variation to microbial load

(2017) Doris Vandeputte et al.   NATURE

Strains, functions and dynamics in the expanded Human Microbiome Project

(2017) Jason Lloyd-Price et al.   NATURE

A communal catalogue reveals Earth’s multiscale microbial diversity

(2017) Luke R. Thompson et al.   NATURE

The microbiota of the respiratory tract: gatekeeper to respiratory health

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Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Bacterial colonization and succession in a newly opened hospital

(2017) Simon Lax et al.   Science Translational Medicine

Strain-resolved analysis of hospital rooms and infants reveals overlap between the human and room microbiome

(2017) Brandon Brooks et al.   Nature Communications

Ten questions concerning the microbiomes of buildings

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Microbial analyses of airborne dust collected from dormitory rooms predict the sex of occupants

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Fungal and bacterial growth in floor dust at elevated relative humidity levels

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Fungal and Bacterial Communities in Indoor Dust Follow Different Environmental Determinants

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Efficient Nucleic Acid Extraction and 16S rRNA Gene Sequencing for Bacterial Community Characterization

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An assessment of US microbiome research

(2016) Elizabeth Stulberg et al.   Nature Microbiology

Urban Transit System Microbial Communities Differ by Surface Type and Interaction with Humans and the Environment

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Rhinitis, Ocular, Throat and Dermal Symptoms, Headache and Tiredness among Students in Schools from Johor Bahru, Malaysia: Associations with Fungal DNA and Mycotoxins in Classroom Dust

(2016) Dan Norbäck et al.   PLoS One

Indoor air bacterial communities in Hong Kong households assemble independently of occupant skin microbiomes

(2015) David Wilkins et al.   ENVIRONMENTAL MICROBIOLOGY

From commensalism to mutualism: integrating the microbial ecology, building science, and indoor air communities to advance research on the indoor microbiome

(2015) Brent Stephens et al.   INDOOR AIR

Fungal compositions and diversities on indoor surfaces with visible mold growths in residential buildings in the Seoul Capital Area of South Korea

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Influence of housing characteristics on bacterial and fungal communities in homes of asthmatic children

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Indoor fungi: companions and contaminants

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Indoor fungal diversity and asthma: A meta-analysis and systematic review of risk factors

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Continental-scale distributions of dust-associated bacteria and fungi

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The ecology of microscopic life in household dust

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Sources of airborne microorganisms in the built environment

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Chamber Bioaerosol Study: Outdoor Air and Human Occupants as Sources of Indoor Airborne Microbes

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Indoor-Air Microbiome in an Urban Subway Network: Diversity and Dynamics

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Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

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Airborne Bacterial Communities in Residences: Similarities and Differences with Fungi

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Longitudinal analysis of microbial interaction between humans and the indoor environment

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Combining real-time PCR and next-generation DNA sequencing to provide quantitative comparisons of fungal aerosol populations

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Next-generation DNA sequencing reveals that low fungal diversity in house dust is associated with childhood asthma development

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Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances

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Towards a unified paradigm for sequence-based identification of fungi

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The Diversity and Distribution of Fungi on Residential Surfaces

(2013) Rachel I. Adams et al.   PLoS One

House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection

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Architectural design influences the diversity and structure of the built environment microbiome

(2012) Steven W Kembel et al.   ISME Journal

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

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FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Assessment of indoor environment in Paris child day care centers

(2011) Célina Roda et al.   ENVIRONMENTAL RESEARCH

Fungal DNA in hotel rooms in Europe and Asia—associations with latitude, precipitation, building data, room characteristics and hotel ranking

(2011) Dan Norbäck et al.   JOURNAL OF ENVIRONMENTAL MONITORING

Exposure to Environmental Microorganisms and Childhood Asthma

(2011) Markus J. Ege et al.   NEW ENGLAND JOURNAL OF MEDICINE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

(2010) Eva Bellemain et al.   BMC MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics

(2010) A. S. Amend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal dynamics within a contemporary latitudinal diversity gradient

(2008) Jonathan A. D. Fisher et al.   ECOLOGY LETTERS