Quantifying antibiotic impact on within-patient dynamics of extended-spectrum beta-lactamase resistance

Within-host dynamics shape antibiotic resistance in commensal bacteria

(2019) Nicholas G. Davies et al.   Nature Ecology & Evolution

Estimating the association between antibiotic exposure and colonisation with ESBL-producing Gram negative bacteria: a multicentre, prospective cohort study

(2019) Evelina Tacconelli et al.   CLINICAL MICROBIOLOGY AND INFECTION

Definitions and guidelines for research on antibiotic persistence

(2019) Nathalie Q. Balaban et al.   NATURE REVIEWS MICROBIOLOGY

Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis

(2018) Evelina Tacconelli et al.   LANCET INFECTIOUS DISEASES

Quantifying where human acquisition of antibiotic resistance occurs: a mathematical modelling study

(2018) Gwenan M. Knight et al.   BMC Medicine

Carriage of extended-spectrum beta-lactamase-producing Enterobacteriaceae and the risk of surgical site infection after colorectal surgery: a prospective cohort study

(2018) Biana Dubinsky-Pertzov et al.   CLINICAL INFECTIOUS DISEASES

Extensive impact of non-antibiotic drugs on human gut bacteria

(2018) Lisa Maier et al.   NATURE

Evolutionary epidemiology models to predict the dynamics of antibiotic resistance

(2018) François Blanquart   Evolutionary Applications

Microbiome as a tool and a target in the effort to address antimicrobial resistance

(2018) David A. Relman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora

(2018) Christine Tedijanto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stan: A Probabilistic Programming Language

(2017) Bob Carpenter et al.   Journal of Statistical Software

Import and spread of extended-spectrum β-lactamase-producing Enterobacteriaceae by international travellers (COMBAT study): a prospective, multicentre cohort study

(2017) Maris S Arcilla et al.   LANCET INFECTIOUS DISEASES

Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects

(2017) Elena Buelow et al.   Microbiome

Practical Bayesian model evaluation using leave-one-out cross-validation and WAIC

(2016) Aki Vehtari et al.   STATISTICS AND COMPUTING

Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome

(2016) Molly K. Gibson et al.   Nature Microbiology

Monitoring antibiotic-resistant enterobacteria faecal levels is helpful in predicting antibiotic susceptibility of bacteraemia isolates in patients with haematological malignancies

(2015) Paul-Louis Woerther et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Effects of selective digestive decontamination (SDD) on the gut resistome

(2014) Elena Buelow et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Mathematical Modeling of Bacterial Kinetics to Predict the Impact of Antibiotic Colonic Exposure and Treatment Duration on the Amount of Resistant Enterobacteria Excreted

(2014) Thu Thuy Nguyen et al.   PLoS Computational Biology

Antibiotic Administration Routes Significantly Influence the Levels of Antibiotic Resistance in Gut Microbiota

(2013) Lu Zhang et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Rectal Swabs Are Suitable for Quantifying the Carriage Load of KPC-Producing Carbapenem-Resistant Enterobacteriaceae

(2013) A. Lerner et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota

(2013) Richard R. Stein et al.   PLoS Computational Biology

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Population pharmacokinetics of ceftriaxone in critically ill septic patients: a reappraisal

(2011) Denis Garot et al.   BRITISH JOURNAL OF CLINICAL PHARMACOLOGY

The population genetics of antibiotic resistance: integrating molecular mechanisms and treatment contexts

(2010) R. Craig MacLean et al.   NATURE REVIEWS GENETICS

Functional relationship between bacterial cell density and the efficacy of antibiotics

(2009) K. I. Udekwu et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY