The Cellular Response to Lanthanum Is Substrate Specific and Reveals a Novel Route for Glycerol Metabolism in Pseudomonas putida KT2440

Use of rare-earth elements in the phyllosphere colonizer Methylobacterium extorquens PA1

(2019) Andrea M. Ochsner et al.   MOLECULAR MICROBIOLOGY

A Selective, Protein-Based Fluorescent Sensor with Picomolar Affinity for Rare Earth Elements

(2019) Joseph A. Mattocks et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A mutagenic screen identifies a TonB-dependent receptor required for the lanthanide metal switch in the Type I methanotroph “Methylotuvimicrobium buryatense” 5GB1C

(2019) Joseph D. Groom et al.   JOURNAL OF BACTERIOLOGY

Rare Earth Element (REE)-Dependent Growth of Pseudomonas putida KT2440 Relies on the ABC-Transporter PedA1A2BC and Is Influenced by Iron Availability

(2019) Matthias Wehrmann et al.   Frontiers in Microbiology

Isolation and genomic characterization of Novimethylophilus kurashikiensis gen. nov. sp. nov., a new lanthanide-dependent methylotrophic species of Methylophilaceae

(2018) Haoxin Lv et al.   ENVIRONMENTAL MICROBIOLOGY

Physiological Effect of XoxG(4) on Lanthanide-Dependent Methanotrophy

(2018) Yue Zheng et al.   mBio

Lanthanide-Dependent Regulation of Methylotrophy in Methylobacterium aquaticum Strain 22A

(2018) Sachiko Masuda et al.   mSphere

The PedS2/PedR2 Two-Component System Is Crucial for the Rare Earth Element Switch in Pseudomonas putida KT2440

(2018) Matthias Wehrmann et al.   mSphere

Lanmodulin: A Highly Selective Lanthanide-Binding Protein from a Lanthanide-Utilizing Bacterium

(2018) Joseph A. Cotruvo et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR

(2018) Ilya R. Akberdin et al.   Frontiers in Microbiology

Functional Role of Lanthanides in Enzymatic Activity and Transcriptional Regulation of Pyrroloquinoline Quinone-Dependent Alcohol Dehydrogenases in Pseudomonas putida KT2440

(2017) Matthias Wehrmann et al.   mBio

XoxF Acts as the Predominant Methanol Dehydrogenase in the Type I Methanotroph Methylomicrobium buryatense

(2016) Frances Chu et al.   JOURNAL OF BACTERIOLOGY

Pyrroloquinoline Quinone Ethanol Dehydrogenase in Methylobacterium extorquens AM1 Extends Lanthanide-Dependent Metabolism to Multicarbon Substrates

(2016) Nathan M. Good et al.   JOURNAL OF BACTERIOLOGY

Lanthanide-Dependent Regulation of Methanol Oxidation Systems in Methylobacterium extorquens AM1 and Their Contribution to Methanol Growth

(2016) Huong N. Vu et al.   JOURNAL OF BACTERIOLOGY

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Lanthanide-dependent cross-feeding of methane-derived carbon is linked by microbial community interactions

(2016) Sascha M. B. Krause et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lanthanides: New life metals?

(2016) Ludmila Chistoserdova   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

MxaY regulates the lanthanide-mediated methanol dehydrogenase switch inMethylomicrobium buryatense

(2016) Frances Chu et al.   PeerJ

Cerium Regulates Expression of Alternative Methanol Dehydrogenases in Methylosinus trichosporium OB3b

(2015) Muhammad Farhan Ul Haque et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

XoxFencoding an alternative methanol dehydrogenase is widespread in coastal marine environments

(2015) Martin Taubert et al.   ENVIRONMENTAL MICROBIOLOGY

Volatile affairs in microbial interactions

(2015) Ruth Schmidt et al.   ISME Journal

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

The Glycerol-Dependent Metabolic Persistence of Pseudomonas putida KT2440 Reflects the Regulatory Logic of the GlpR Repressor

(2015) Pablo I. Nikel et al.   mBio

Tn7-Based Device for Calibrated Heterologous Gene Expression in Pseudomonas putida

(2015) Sebastian Zobel et al.   ACS Synthetic Biology

grofit: Fitting Biological Growth Curves withR

(2015) Matthias Kahm et al.   Journal of Statistical Software

PQQ-dependent methanol dehydrogenases: rare-earth elements make a difference

(2014) Jan T. Keltjens et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Expanded microbial genome coverage and improved protein family annotation in the COG database

(2014) Michael Y. Galperin et al.   NUCLEIC ACIDS RESEARCH

The two-step electrochemical oxidation of alcohols using a novel recombinant PQQ alcohol dehydrogenase as a catalyst for a bioanode

(2013) Kouta Takeda et al.   BIOELECTROCHEMISTRY

Rare earth metals are essential for methanotrophic life in volcanic mudpots

(2013) Arjan Pol et al.   ENVIRONMENTAL MICROBIOLOGY

Metabolic and regulatory rearrangements underlying glycerol metabolism inPseudomonas putida KT2440

(2013) Pablo I. Nikel et al.   ENVIRONMENTAL MICROBIOLOGY

Ethylene Glycol Metabolism by Pseudomonas putida

(2012) Björn Mückschel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Development of a Method for Markerless Gene Deletion in Pseudomonas putida

(2011) Nadja Graf et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular structure of La3+-induced methanol dehydrogenase-like protein in Methylobacterium radiotolerans

(2011) Yoshihisa Hibi et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Molecular structure and gene analysis of Ce3+-induced methanol dehydrogenase of Bradyrhizobium sp. MAFF211645

(2011) Nanung Agus Fitriyanto et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Volatile organic compounds (VOCs) in soils

(2010) Heribert Insam et al.   BIOLOGY AND FERTILITY OF SOILS

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

(2010) Sarah M Sowell et al.   ISME Journal

Ce3+-induced exopolysaccharide production by Bradyrhizobium sp. MAFF211645

(2010) Nanung Agus Fitriyanto et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency

(2010) Lilia C. Carvalhais et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U

(2008) Sagrario Arias et al.   ENVIRONMENTAL MICROBIOLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL