Exceptional but vulnerable microbial diversity in coral reef animal surface microbiomes

A census-based estimate of Earth's bacterial and archaeal diversity

(2019) Stilianos Louca et al.   PLOS BIOLOGY

Environmental conditions and neutral processes shape the skin microbiome of European catfish ( Silurus glanis ) populations of Southwestern France

(2019) Marlène Chiarello et al.   Environmental Microbiology Reports

The sponge microbiome within the greater coral reef microbial metacommunity

(2019) Daniel F. R. Cleary et al.   Nature Communications

Microbial Community Shifts Associated With the Ongoing Stony Coral Tissue Loss Disease Outbreak on the Florida Reef Tract

(2019) Julie L. Meyer et al.   Frontiers in Microbiology

The distinction of CPR bacteria from other bacteria based on protein family content

(2019) Raphaël Méheust et al.   Nature Communications

Co‐dynamics of Symbiodiniaceae and bacterial populations during the first year of symbiosis with Acropora tenuis juveniles

(2019) Kate M. Quigley et al.   MicrobiologyOpen

Light color acclimation is a key process in the global ocean distribution ofSynechococcus cyanobacteria

(2018) Théophile Grébert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Gut Microbiota of Marine Fish

(2018) Sian Egerton et al.   Frontiers in Microbiology

Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information

(2018) Stefan Janssen et al.   mSystems

The Gills of Reef Fish Support a Distinct Microbiome Influenced by Host-Specific Factors

(2018) Zoe A. Pratte et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Revisiting the Taxonomy of the Genus Arcobacter: Getting Order From the Chaos

(2018) Alba Pérez-Cataluña et al.   Frontiers in Microbiology

Skin microbiome of coral reef fish is highly variable and driven by host phylogeny and diet

(2018) Marlène Chiarello et al.   Microbiome

Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny

(2018) F. Joseph Pollock et al.   Nature Communications

Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products

(2018) Zhengyao Xue et al.   mSphere

Global warming and recurrent mass bleaching of corals

(2017) Terry P. Hughes et al.   NATURE

Dynamics of coral-associated bacterial communities acclimated to temperature stress based on recent thermal history

(2017) Jia-Ho Shiu et al.   Scientific Reports

Sustaining Rare Marine Microorganisms: Macroorganisms As Repositories and Dispersal Agents of Microbial Diversity

(2017) Marc Troussellier et al.   Frontiers in Microbiology

The Skin-Mucus Microbial Community of Farmed Atlantic Salmon (Salmo salar)

(2017) Giusi Minniti et al.   Frontiers in Microbiology

Season, but not symbiont state, drives microbiome structure in the temperate coral Astrangia poculata

(2017) Koty H. Sharp et al.   Microbiome

Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts

(2017) Matthew J. Neave et al.   Scientific Reports

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

(2016) David G. Bourne et al.   Annual Review of Microbiology

Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas

(2016) Matthew J. Neave et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Global biogeography of Prochlorococcus genome diversity in the surface ocean

(2016) Alyssa G Kent et al.   ISME Journal

The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance

(2016) Bettina Glasl et al.   ISME Journal

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

(2016) Jesse R. Zaneveld et al.   Nature Communications

The soft coral fauna (Octocorallia: Alcyonacea) of Mayotte

(2016) Michael H. Schleyer et al.   Marine Biodiversity

Distinguishing between Microbial Habitats Unravels Ecological Complexity in Coral Microbiomes

(2016) Amy Apprill et al.   mSystems

Species Richness on Coral Reefs and the Pursuit of Convergent Global Estimates

(2015) Rebecca Fisher et al.   CURRENT BIOLOGY

Stable and sporadic symbiotic communities of coral and algal holobionts

(2015) Eric R Hester et al.   ISME Journal

The future of evolutionary diversity in reef corals

(2015) D. Huang et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Marine defaunation: Animal loss in the global ocean

(2015) D. J. McCauley et al.   SCIENCE

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Microbiomes in light of traits: A phylogenetic perspective

(2015) J. B. H. Martiny et al.   SCIENCE

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Double Jeopardy and Global Extinction Risk in Corals and Reef Fishes

(2014) Terry P. Hughes et al.   CURRENT BIOLOGY

Implications of streamlining theory for microbial ecology

(2014) Stephen J Giovannoni et al.   ISME Journal

Phylogenetic signal in the community structure of host-specific microbiomes of tropical marine sponges

(2014) Cole G. Easson et al.   Frontiers in Microbiology

Diversity of the skin microbiota of fishes: evidence for host species specificity

(2013) Andrea Larsen et al.   FEMS MICROBIOLOGY ECOLOGY

Global Biogeography of Reef Fishes: A Hierarchical Quantitative Delineation of Regions

(2013) Michel Kulbicki et al.   PLoS One

Bacterial communities and species-specific associations with the mucus of Brazilian coral species

(2013) Camila Carlos et al.   Scientific Reports

Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria

(2013) Rohit Ghai et al.   Scientific Reports

Occurrence and antibiotic susceptibility profiles ofBurkholderia cepaciacomplex in coastal marine environment

(2012) Ana Maravić et al.   INTERNATIONAL JOURNAL OF ENVIRONMENTAL HEALTH RESEARCH

Members of native coral microbiota inhibit glycosidases and thwart colonization of coral mucus by an opportunistic pathogen

(2012) Cory J Krediet et al.   ISME Journal

Sea cucumber (Aspidochirotida) community, distribution and habitat utilization on the reefs of Mayotte, Western Indian Ocean

(2012) H Eriksson et al.   MARINE ECOLOGY PROGRESS SERIES

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

Extinction vulnerability of coral reef fishes

(2011) Nicholas A. J. Graham et al.   ECOLOGY LETTERS

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

(2011) Chris L Dupont et al.   ISME Journal

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

A New Phylogenetic Diversity Measure Generalizing the Shannon Index and Its Application to Phyllostomid Bats

(2009) Benjamin Allen et al.   AMERICAN NATURALIST

Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata

(2009) Shinichi Sunagawa et al.   ISME Journal

Resilience of Coral-Associated Bacterial Communities Exposed to Fish Farm Effluent

(2009) Melissa Garren et al.   PLoS One

Coral reefs

(2008) Nancy Knowlton   CURRENT BIOLOGY

Beyond corals and fish: the effects of climate change on noncoral benthic invertebrates of tropical reefs

(2008) RACHEL PRZESLAWSKI et al.   GLOBAL CHANGE BIOLOGY