GPS-Palm: a deep learning-based graphic presentation system for the prediction of S-palmitoylation sites in proteins

Inhibiting PD-L1 palmitoylation enhances T-cell immune responses against tumours

(2019) Han Yao et al.   Nature Biomedical Engineering

Palmitoylation of NOD1 and NOD2 is required for bacterial sensing

(2019) Yan Lu et al.   SCIENCE

WocEA: The visualization of functional enrichment results in word clouds

(2018) Wanshan Ning et al.   Journal of Genetics and Genomics

Palmitoylation controls trafficking of the intracellular Ca2+ channel MCOLN3/TRPML3 to regulate autophagy

(2018) So Woon Kim et al.   Autophagy

A universal SNP and small-indel variant caller using deep neural networks

(2018) Ryan Poplin et al.   NATURE BIOTECHNOLOGY

Metabolites as regulators of insulin sensitivity and metabolism

(2018) Qin Yang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

PTMD: A Database of Human Disease-associated Post-translational Modifications

(2018) Haodong Xu et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Palmitoylation-dependent activation of MC1R prevents melanomagenesis

(2017) Shuyang Chen et al.   NATURE

MDD-Palm: Identification of protein S-palmitoylation sites with substrate motifs based on maximal dependence decomposition

(2017) Shun-Long Weng et al.   PLoS One

Lack of BACE1 S-palmitoylation reduces amyloid burden and mitigates memory deficits in transgenic mouse models of Alzheimer’s disease

(2017) Robert J. Andrew et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lipidated proteins: Spotlight on protein-membrane binding interfaces

(2017) Arjun Ray et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

Role of S-Palmitoylation by ZDHHC13 in Mitochondrial function and Metabolism in Liver

(2017) Li-Fen Shen et al.   Scientific Reports

Global, site-specific analysis of neuronal protein S-acylation

(2017) Mark O. Collins et al.   Scientific Reports

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

GPS-Lipid: a robust tool for the prediction of multiple lipid modification sites

(2016) Yubin Xie et al.   Scientific Reports

In Silico Identification of Protein S-Palmitoylation Sites and Their Involvement in Human Inherited Disease

(2015) Shuyan Li et al.   Journal of Chemical Information and Modeling

dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins

(2015) Kai-Yao Huang et al.   NUCLEIC ACIDS RESEARCH

PalmPred: An SVM Based Palmitoylation Prediction Method Using Sequence Profile Information

(2014) Bandana Kumari et al.   PLoS One

The prediction of palmitoylation site locations using a multiple feature extraction method

(2013) Shao-Ping Shi et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

pLogo: a probabilistic approach to visualizing sequence motifs

(2013) Joseph P O'Shea et al.   NATURE METHODS

Huntingtin-interacting protein 14 is a type 1 diabetes candidate protein regulating insulin secretion and  -cell apoptosis

(2011) L. A. Berchtold et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improved Prediction of Palmitoylation Sites Using PWMs and SVM

(2011) Yu-Xin Li et al.   PROTEIN AND PEPTIDE LETTERS

Prediction and analysis of protein palmitoylation sites

(2010) Le-Le Hu et al.   BIOCHIMIE

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Site-specific analysis of proteinS-acylation by resin-assisted capture

(2010) Michael T. Forrester et al.   JOURNAL OF LIPID RESEARCH

Mice with Alopecia, Osteoporosis, and Systemic Amyloidosis Due to Mutation in Zdhhc13, a Gene Coding for Palmitoyl Acyltransferase

(2010) Amir N. Saleem et al.   PLoS Genetics

Proteome Scale Characterization of HumanS-Acylated Proteins in Lipid Raft-enriched and Non-raft Membranes

(2009) Wei Yang et al.   MOLECULAR & CELLULAR PROTEOMICS

Large-scale profiling of protein palmitoylation in mammalian cells

(2009) Brent R Martin et al.   NATURE METHODS

Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs

(2009) X.-B. Wang et al.   PROTEIN ENGINEERING DESIGN & SELECTION

GPS 2.0, a Tool to Predict Kinase-specific Phosphorylation Sites in Hierarchy

(2008) Yu Xue et al.   MOLECULAR & CELLULAR PROTEOMICS

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH

CSS-Palm 2.0: an updated software for palmitoylation sites prediction

(2008) J. Ren et al.   PROTEIN ENGINEERING DESIGN & SELECTION