Patterns of hybridization and cryptic introgression among one- and four-needled pinyon pines

Tracing the footprints of a moving hybrid zone under a demographic history of speciation with gene flow

(2019) Mitra Menon et al.   Evolutionary Applications

Phylogenetics of Pinus Subsection Cembroides Engelm. (Pinaceae) Inferred from Low-Copy Nuclear Gene Sequences

(2019) José Rubén Montes et al.   SYSTEMATIC BOTANY

Speciation in the presence of gene flow: population genomics of closely related and diverging Eucalyptus species

(2018) Susan Rutherford et al.   HEREDITY

The role of hybridization during ecological divergence of southwestern white pine (Pinus strobiformis ) and limber pine (P. flexilis )

(2018) Mitra Menon et al.   MOLECULAR ECOLOGY

dartr : An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing

(2018) Bernd Gruber et al.   Molecular Ecology Resources

Adaptive introgression and maintenance of a trispecies hybrid complex in range-edge populations of Populus

(2018) Vikram E. Chhatre et al.   MOLECULAR ECOLOGY

Contrasting Rates of Molecular Evolution and Patterns of Selection among Gymnosperms and Flowering Plants

(2017) Amanda R. De La Torre et al.   MOLECULAR BIOLOGY AND EVOLUTION

Unpacking boxes: Integration of molecular, morphological and ecological approaches reveals extensive patterns of reticulate evolution in box eucalypts

(2017) Lluvia Flores-Rentería et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Natural hybridization and genetic and morphological variation between two epiphytic bromeliads

(2017) Jordana Neri et al.   AoB Plants

Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates

(2017) Jane Melville et al.   Royal Society Open Science

pophelper: an R package and web app to analyse and visualize population structure

(2016) R. M. Francis   Molecular Ecology Resources

Who’s your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod

(2016) Alan J. Couch et al.   PeerJ

Variation in morphological traits in a recent hybrid zone between closely related Quercus liaotungensis and Q. mongolica (Fagaceae)

(2015) L. Wei et al.   Journal of Plant Ecology

Variation in morphological traits in a recent hybrid zone between closely related Quercus liaotungensis and Q. mongolica (Fagaceae)

(2015) L. Wei et al.   Journal of Plant Ecology

WEAK CROSSABILITY BARRIER BUT STRONG JUVENILE SELECTION SUPPORTS ECOLOGICAL SPECIATION OF THE HYBRID PINEPINUS DENSATAON THE TIBETAN PLATEAU

(2014) Wei Zhao et al.   EVOLUTION

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Hybridization and speciation

(2013) R. Abbott et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Genetic, morphological, geographical and ecological approaches reveal phylogenetic relationships in complex groups, an example of recently diverged pinyon pine species (Subsection Cembroides)

(2013) Lluvia Flores-Rentería et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Development of DArT Marker Platforms and Genetic Diversity Assessment of the U.S. Collection of the New Oilseed Crop Lesquerella and Related Species

(2013) Von Mark V. Cruz et al.   PLoS One

Slow but not low: genomic comparisons reveal slower evolutionary rate and higher dN/dS in conifers compared to angiosperms

(2012) Emmanuel Buschiazzo et al.   BMC EVOLUTIONARY BIOLOGY

From middens to molecules: phylogeography of the piñon pine, Pinus edulis

(2012) Kristy L. Duran et al.   JOURNAL OF BIOGEOGRAPHY

Next-generation hybridization and introgression

(2011) A D Twyford et al.   HEREDITY

Long-distance pine pollen still germinates after meso-scale dispersal

(2010) Claire G. Williams   AMERICAN JOURNAL OF BOTANY

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Cryptic hybrids between Pinus uncinata and P. sylvestris

(2010) ANNA K. JASIŃSKA et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

The Role of Hybridization in Plant Speciation

(2009) Pamela S. Soltis et al.   Annual Review of Plant Biology

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Reticulate evolution and incomplete lineage sorting among the ponderosa pines

(2009) Ann Willyard et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: Incomplete concerted evolution and the origin of pseudogenes

(2009) Long-Qian Xiao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS