Solution of Levinthal’s Paradox and a Physical Theory of Protein Folding Times

Improved protein structure prediction using potentials from deep learning

(2020) Andrew W. Senior et al.   NATURE

Cotranslational Folding of Proteins on the Ribosome

(2020) Marija Liutkute et al.   Biomolecules

Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13)

(2019) Andrew W. Senior et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Life in Phases: Intra- and Inter- Molecular Phase Transitions in Protein Solutions

(2019) Vladimir N. Uversky et al.   Biomolecules

Cotranslational assembly of protein complexes in eukaryotes revealed by ribosome profiling

(2018) Ayala Shiber et al.   NATURE

Mechanisms of Cotranslational Maturation of Newly Synthesized Proteins

(2018) Günter Kramer et al.   Annual Review of Biochemistry

The stop and go traffic regulating protein biogenesis: how translation kinetics control proteostasis

(2018) Kevin C. Stein et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Folding pathway of an Ig domain is conserved on and off the ribosome

(2018) Pengfei Tian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Some additional remarks to the solution of the protein folding puzzle

(2017) Alexei V. Finkelstein   Physics of Life Reviews

There and back again: Two views on the protein folding puzzle

(2017) Alexei V. Finkelstein et al.   Physics of Life Reviews

Reduction of the Search Space for the Folding of Proteins at the Level of Formation and Assembly of Secondary Structures: A New View on the Solution of Levinthal′s Paradox

(2015) Alexei V. Finkelstein et al.   CHEMPHYSCHEM

Prediction of protein folding rates from simplified secondary structure alphabet

(2015) Jitao T. Huang et al.   JOURNAL OF THEORETICAL BIOLOGY

Cotranslational protein folding on the ribosome monitored in real time

(2015) W. Holtkamp et al.   SCIENCE

Machine Learning: How Much Does It Tell about Protein Folding Rates?

(2015) Marc Corrales et al.   PLoS One

Restrictions to protein folding determined by the protein size

(2013) Alexei V. Finkelstein et al.   FEBS LETTERS

Monitoring cotranslational protein folding in mammalian cells at codon resolution

(2012) Y. Han et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Golden triangle for folding rates of globular proteins

(2012) S. O. Garbuzynskiy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Protein-Folding Problem, 50 Years On

(2012) K. A. Dill et al.   SCIENCE

Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes

(2011) Nicholas T. Ingolia et al.   CELL

SeqRate: sequence-based protein folding type classification and rates prediction

(2010) Guan Lin et al.   BMC BIOINFORMATICS

Cotranslational structure acquisition of nascent polypeptides monitored by NMR spectroscopy

(2010) C. Eichmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coupling between Properties of the Protein Shape and the Rate of Protein Folding

(2009) Dmitry N. Ivankov et al.   PLoS One

Analysis and prediction of protein folding rates using quadratic response surface models

(2008) Liang-Tsung Huang et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Prediction of protein folding rates from primary sequences using hybrid sequence representation

(2008) Yingfu Jiang et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

KineticDB: a database of protein folding kinetics

(2008) N. S. Bogatyreva et al.   NUCLEIC ACIDS RESEARCH

A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling

(2005) Stefan Wallin et al.   PROTEIN SCIENCE