Identification of Novel lncRNAs Differentially Expressed in Placentas of Chinese Ningqiang Pony and Yili Horse Breeds

Evaluation of an HMGA2 variant for pleiotropic effects on height and metabolic traits in ponies

(2019) Elaine M. Norton et al.   JOURNAL OF VETERINARY INTERNAL MEDICINE

Small non-coding RNA and colorectal cancer

(2019) Hui Chen et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

Bi-allelic Variants in IQSEC1 Cause Intellectual Disability, Developmental Delay, and Short Stature

(2019) Muhammad Ansar et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Comprehensive genome and transcriptome analyses reveal genetic relationship, selection signature, and transcriptome landscape of small-sized Korean native Jeju horse

(2019) Krishnamoorthy Srikanth et al.   Scientific Reports

Genome data uncover four synergistic key regulators for extremely small body size in horses

(2018) Julia Metzger et al.   BMC GENOMICS

Identification on novel locus of dairy traits of Kazakh horse in Xinjiang

(2018) Ling-Ling Liu et al.   GENE

Detecting selection signatures on the X chromosome of the Chinese Debao pony

(2018) X.-X. Liu et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Multiple alleles of ACAN associated with chondrodysplastic dwarfism in Miniature horses

(2018) J. E. Eberth et al.   ANIMAL GENETICS

Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species

(2018) Colin Kern et al.   BMC GENOMICS

Polymorphisms in the LASP1 gene allow selection for smaller stature in ponies

(2018) Aylton Bartholazzi Junior et al.   Livestock Science

Genome-wide analysis of long non-coding RNAs at the mature stage of sea buckthorn ( Hippophae rhamnoides Linn) fruit

(2017) Guoyun Zhang et al.   GENE

Identification of copy number variations in three Chinese horse breeds using 70K single nucleotide polymorphism BeadChip array

(2016) Adiljan Kader et al.   ANIMAL GENETICS

Dwarfism with joint laxity in Friesian horses is associated with a splice site mutation in B4GALT7

(2016) Peter A. Leegwater et al.   BMC GENOMICS

Whole-genome sequencing reveals a potential causal mutation for dwarfism in the Miniature Shetland pony

(2016) Julia Metzger et al.   MAMMALIAN GENOME

Alternative Splicing of Four Trafficking Genes Regulates Myofiber Structure and Skeletal Muscle Physiology

(2016) Jimena Giudice et al.   Cell Reports

T-box3 is a ciliary protein and regulates stability of the Gli3 transcription factor to control digit number

(2016) Uchenna Emechebe et al.   eLife

Genome-wide RNA-Seq analysis of breast muscles of two broiler chicken groups differing in shear force

(2015) K. Piórkowska et al.   ANIMAL GENETICS

Population Variation Reveals Independent Selection toward Small Body Size in Chinese Debao Pony

(2015) Adiljan Kader et al.   Genome Biology and Evolution

New animal models reveal that coenzyme Q2 (Coq2) and placenta-specific 8 (Plac8) are candidate genes for the onset of type 2 diabetes associated with obesity in rats

(2015) Daiki Sasaki et al.   MAMMALIAN GENOME

The Landscape of long noncoding RNA classification

(2015) Georges St. Laurent et al.   TRENDS IN GENETICS

KAT5-mediated SOX4 acetylation orchestrates chromatin remodeling during myoblast differentiation

(2015) S-M Jang et al.   Cell Death & Disease

Characterization and Comparative Analysis of the Milk Transcriptome in Two Dairy Sheep Breeds using RNA Sequencing

(2015) Aroa Suárez-Vega et al.   Scientific Reports

Principles of Long Noncoding RNA Evolution Derived from Direct Comparison of Transcriptomes in 17 Species

(2015) Hadas Hezroni et al.   Cell Reports

A Non-Synonymous HMGA2 Variant Decreases Height in Shetland Ponies and Other Small Horses

(2015) Mirjam Frischknecht et al.   PLoS One

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

RNA-Seq Transcriptome Profiling of Equine Inner Cell Mass and Trophectoderm1

(2014) Khursheed Iqbal et al.   BIOLOGY OF REPRODUCTION

Comparative transcriptomic analysis to identify differentially expressed genes in fat tissue of adult Berkshire and Jeju Native Pig using RNA-seq

(2014) Simrinder Singh Sodhi et al.   MOLECULAR BIOLOGY REPORTS

Novel Mutations in BMPR2, ACVRL1 and KCNA5 Genes and Hemodynamic Parameters in Patients with Pulmonary Arterial Hypertension

(2014) Guillermo Pousada et al.   PLoS One

A genome-wide association study indicatesLCORL/NCAPGas a candidate locus for withers height in German Warmblood horses

(2013) J. Tetens et al.   ANIMAL GENETICS

ZNF281 Knockdown Induced Osteogenic Differentiation of Human Multipotent Stem Cells in Vivo and in Vitro

(2013) Kwang-Won Seo et al.   CELL TRANSPLANTATION

The oncogenic TBX3 is a downstream target and mediator of the TGF-β1 signaling pathway

(2013) Jarod Li et al.   MOLECULAR BIOLOGY OF THE CELL

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Expression Levels of LCORL Are Associated with Body Size in Horses

(2013) Julia Metzger et al.   PLoS One

Identification and function of long non-coding RNA

(2013) Carl Ernst et al.   Frontiers in Cellular Neuroscience

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Copy number expansion of the STX17 duplication in melanoma tissue from Grey horses

(2012) Elisabeth Sundström et al.   BMC GENOMICS

The breadth of the placental surface but not the length is associated with body size at birth

(2012) S.H. Alwasel et al.   PLACENTA

Four Loci Explain 83% of Size Variation in the Horse

(2012) Shokouh Makvandi-Nejad et al.   PLoS One

Genome-wide SNP association-based localization of a dwarfism gene in Friesian dwarf horses

(2010) N. Orr et al.   ANIMAL GENETICS

The trafficking protein Tmed2/p24β1 is required for morphogenesis of the mouse embryo and placenta

(2010) Loydie A. Jerome-Majewska et al.   DEVELOPMENTAL BIOLOGY

Lgr6 Marks Stem Cells in the Hair Follicle That Generate All Cell Lineages of the Skin

(2010) H. J. Snippert et al.   SCIENCE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Long non-coding RNAs: insights into functions

(2009) Tim R. Mercer et al.   NATURE REVIEWS GENETICS

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY