Animal, Fungi, and Plant Genome Sequences Harbor Different Non-Canonical Splice Sites
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Title
Animal, Fungi, and Plant Genome Sequences Harbor Different Non-Canonical Splice Sites
Authors
Keywords
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Journal
Cells
Volume 9, Issue 2, Pages 458
Publisher
MDPI AG
Online
2020-02-25
DOI
10.3390/cells9020458
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Note: Only part of the references are listed.- Highly parallel direct RNA sequencing on an array of nanopores
- (2018) Daniel R Garalde et al. NATURE METHODS
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- (2018) Boas Pucker et al. BMC GENOMICS
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- (2017) Max E. Wilkinson et al. SCIENCE
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- (2016) Christopher R. Sibley et al. NATURE REVIEWS GENETICS
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
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- OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
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- A comprehensive survey of non-canonical splice sites in the human transcriptome
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- (2013) E. P. Nawrocki et al. BIOINFORMATICS
- Fungal Alternative Splicing is Associated with Multicellular Complexity and Virulence: A Genome-Wide Multi-Species Study
- (2013) K. Grutzmann et al. DNA RESEARCH
- Pick one, but be quick: 5' splice sites and the problems of too many choices
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- The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
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- The Role of Canonical and Noncanonical Pre-mRNA Splicing in Plant Stress Responses
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- A conserved unusual posttranscriptional processing mediated by short, direct repeated (SDR) sequences in plants
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- The Spliceosome: Design Principles of a Dynamic RNP Machine
- (2009) Markus C. Wahl et al. CELL
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