Computational Identification of the Proteins Associated With Quorum Sensing and Biofilm Formation in Mycobacterium tuberculosis

Peptidyl-prolyl isomerase-B is involved in Mycobacterium tuberculosis biofilm formation and a generic target for drug repurposing-based intervention

(2019) Ashutosh Kumar et al.   npj Biofilms and Microbiomes

The bifunctional protein GlmU is a key factor in biofilm formation induced by alkylating stress in Mycobacterium smegmatis

(2019) Angela Di Somma et al.   RESEARCH IN MICROBIOLOGY

The global tuberculosis epidemic and progress in care, prevention, and research: an overview in year 3 of the End TB era

(2018) Katherine Floyd et al.   Lancet Respiratory Medicine

Resuscitation-Promoting Factors Are Required for Mycobacterium smegmatis Biofilm Formation

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RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy

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CytoCluster: A Cytoscape Plugin for Cluster Analysis and Visualization of Biological Networks

(2017) Min Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The Ser/Thr Protein Kinase Protein-Protein Interaction Map ofM. tuberculosis

(2017) Fan-Lin Wu et al.   MOLECULAR & CELLULAR PROTEOMICS

RefSeq: an update on prokaryotic genome annotation and curation

(2017) Daniel H Haft et al.   NUCLEIC ACIDS RESEARCH

Comprehensive Essentiality Analysis of the Mycobacterium tuberculosis Genome via Saturating Transposon Mutagenesis

(2017) Michael A. DeJesus et al.   mBio

Biofilms and Cyclic di-GMP (c-di-GMP) Signaling: Lessons fromPseudomonas aeruginosaand Other Bacteria

(2016) Martina Valentini et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

UniProt: the universal protein knowledgebase

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PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements

(2016) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible

(2016) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Thiol reductive stress induces cellulose-anchored biofilm formation in Mycobacterium tuberculosis

(2016) Abhishek Trivedi et al.   Nature Communications

The DNA-binding network of Mycobacterium tuberculosis

(2015) Kyle J. Minch et al.   Nature Communications

The Conserved Hypothetical Protein Rv0574c Is Required for Cell Wall Integrity, Stress Tolerance, and Virulence of Mycobacterium tuberculosis

(2014) Rajni Garg et al.   INFECTION AND IMMUNITY

AStreptococcus uberistransposon mutant screen reveals a negative role for LiaR homologue in biofilm formation

(2014) T. Salomäki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Mycobacterium tuberculosispellicles express unique proteins recognized by the host humoral response

(2014) Patrick W. Kerns et al.   Pathogens and Disease

Essential Roles for Mycobacterium tuberculosis Rel beyond the Production of (p)ppGpp

(2013) L. A. Weiss et al.   JOURNAL OF BACTERIOLOGY

CD271+ Bone Marrow Mesenchymal Stem Cells May Provide a Niche for Dormant Mycobacterium tuberculosis

(2013) B. Das et al.   Science Translational Medicine

The LuxR family regulator Rv0195 modulates Mycobacterium tuberculosis dormancy and virulence

(2013) Haihong Fang et al.   TUBERCULOSIS

Virulence factors of theMycobacterium tuberculosiscomplex

(2013) Marina A. Forrellad et al.   Virulence

Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs

(2012) Zhi-Ping Liu et al.   BMC BIOINFORMATICS

QseC controls biofilm formation of non-typeable Haemophilus influenzae in addition to an AI-2-dependent mechanism

(2012) Can M. Ünal et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Understanding Communication Signals during Mycobacterial Latency through Predicted Genome-Wide Protein Interactions and Boolean Modeling

(2012) Shubhada R. Hegde et al.   PLoS One

The Polyketide Pks1 Contributes to Biofilm Formation in Mycobacterium tuberculosis

(2011) J. M. Pang et al.   JOURNAL OF BACTERIOLOGY

Role and regulation of bacterial LuxR-like regulators

(2011) Jing Chen et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

The Transcriptional Regulatory Network of Mycobacterium tuberculosis

(2011) Joaquín Sanz et al.   PLoS One

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Genome-Wide Identification of Mycobacterium tuberculosis Exported Proteins with Roles in Intracellular Growth

(2010) J. R. McCann et al.   JOURNAL OF BACTERIOLOGY

Genetic Requirements for the Survival of Tubercle Bacilli in Primates

(2010) Noton K. Dutta et al.   JOURNAL OF INFECTIOUS DISEASES

Global Protein−Protein Interaction Network in the Human PathogenMycobacterium tuberculosisH37Rv

(2010) Yi Wang et al.   JOURNAL OF PROTEOME RESEARCH

Identification, Activity and Disulfide Connectivity of C-di-GMP Regulating Proteins in Mycobacterium tuberculosis

(2010) Kajal Gupta et al.   PLoS One

Trehalose-recycling ABC transporter LpqY-SugA-SugB-SugC is essential for virulence of Mycobacterium tuberculosis

(2010) R. Kalscheuer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Quorum-Sensing Network Architectures

(2009) Wai-Leung Ng et al.   Annual Review of Genetics

Evolving concepts in biofilm infections

(2009) Luanne Hall-Stoodley et al.   CELLULAR MICROBIOLOGY

A pivotal role for the response regulator DegU in controlling multicellular behaviour

(2009) E. J. Murray et al.   MICROBIOLOGY-SGM

Effect of biofilm formation on virulence factor secretion via the general secretory pathway in Streptococcus mutans

(2008) MeiJing Huang et al.   ARCHIVES OF ORAL BIOLOGY

Growth ofMycobacterium tuberculosisbiofilms containing free mycolic acids and harbouring drug-tolerant bacteria

(2008) Anil K. Ojha et al.   MOLECULAR MICROBIOLOGY

The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest

(2008) Gábor Balázsi et al.   Molecular Systems Biology

Mycobacterium smegmatisbiofilm formation and sliding motility are affected by the serine/threonine protein kinase PknF

(2007) Radha Gopalaswamy et al.   FEMS MICROBIOLOGY LETTERS