Core and Differentially Abundant Bacterial Taxa in the Rhizosphere of Field Grown Brassica napus Genotypes: Implications for Canola Breeding

Complete genome sequence of Caulobacter flavus RHGG3T, a type species of the genus Caulobacter with plant growth-promoting traits and heavy metal resistance

(2019) Endong Yang et al.   3 Biotech

New evidence of nematode-endosymbiont bacteria coevolution based on one new and one known dagger nematode species of Xiphinema americanum-group (Nematoda, Longidoridae)

(2019) Mahyar Mobasseri et al.   PLoS One

Consortium of Plant Growth-Promoting Rhizobacteria Strains Suppresses Sweet Pepper Disease by Altering the Rhizosphere Microbiota

(2019) Li-Na Zhang et al.   Frontiers in Microbiology

Biocontrol and plant-growth-promoting capacities of actinobacterial strains from the Algerian Sahara and characterisation of Streptosporangium becharense SG1 as a promising biocontrol agent

(2018) Nassira Boukaya et al.   BIOCONTROL SCIENCE AND TECHNOLOGY

A phytobeneficial strain Planomicrobium sp. MSSA-10 triggered oxidative stress responsive mechanisms and regulated the growth of pea plants under induced saline environment

(2018) M. Shahid et al.   JOURNAL OF APPLIED MICROBIOLOGY

16S rDNA Profiling to Reveal the Influence of Seed-Applied Biostimulants on the Rhizosphere of Young Maize Plants

(2018) Giovanna Visioli et al.   MOLECULES

Evaluation of the biocontrol efficacy of a Serratia marcescens strain indigenous to tea rhizosphere for the management of root rot disease in tea

(2018) Gargee Dhar Purkayastha et al.   PLoS One

Canola Root–Associated Microbiomes in the Canadian Prairies

(2018) Chih-Ying Lay et al.   Frontiers in Microbiology

Putative Nitrogen-Fixing Bacteria Associated With the Rhizosphere and Root Endosphere of Wheat Plants Grown in an Andisol From Southern Chile

(2018) Joaquin I. Rilling et al.   Frontiers in Microbiology

Fungal inoculants in the field: Is the reward greater than the risk?

(2017) Miranda M. Hart et al.   FUNCTIONAL ECOLOGY

Exploration of bacterial N2-fixation systems in association with soil-grown sugarcane, sweet potato, and paddy rice: a review and synthesis

(2017) Tadakatsu Yoneyama et al.   SOIL SCIENCE AND PLANT NUTRITION

Microbiomes associated with infective stages of root-knot and lesion nematodes in soil

(2017) Ahmed Elhady et al.   PLoS One

Comparative analysis of bacterial community structure in the rhizosphere of maize by high-throughput pyrosequencing

(2017) Yi Yang et al.   PLoS One

Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar

(2017) Amit K. Jaiswal et al.   Scientific Reports

Managing clubroot disease (caused by Plasmodiophora brassicae Wor.) by exploiting the interactions between calcium cyanamide fertilizer and soil microorganisms

(2016) G. R. DIXON   JOURNAL OF AGRICULTURAL SCIENCE

The composition, localization and function of low-temperature-adapted microbial communities involved in methanogenic degradations of cellulose and chitin from Qinghai-Tibetan Plateau wetland soils

(2016) Y. Dai et al.   JOURNAL OF APPLIED MICROBIOLOGY

Bio-protective microbial agents from rhizosphere eco-systems trigger plant defense responses provide protection against sheath blight disease in rice ( Oryza sativa L.)

(2016) Udai B. Singh et al.   MICROBIOLOGICAL RESEARCH

A method for simultaneous measurement of soil bacterial abundances and community composition via 16S rRNA gene sequencing

(2016) Wenke Smets et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity, distribution, and antagonistic activities of rhizobacteria of Panax notoginseng

(2016) Ze-Yan Fan et al.   Journal of Ginseng Research

Editorial: Harnessing Useful Rhizosphere Microorganisms for Pathogen and Pest Biocontrol

(2016) Aurelio Ciancio et al.   Frontiers in Microbiology

Managing clubroot disease (caused by Plasmodiophora brassicae Wor.) by exploiting the interactions between calcium cyanamide fertilizer and soil microorganisms

(2016) G. R. DIXON   JOURNAL OF AGRICULTURAL SCIENCE

A new view of the tree of life

(2016) Laura A. Hug et al.   Nature Microbiology

Phytobeneficial Properties of Bacteria Isolated from the Rhizosphere of Maize in Southwestern Nigerian Soils

(2015) M. A. Abiala et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PGPR enhanced phytoremediation of petroleum contaminated soil and rhizosphere microbial community response

(2015) Jinyu Hou et al.   CHEMOSPHERE

Premature germination of resting spores as a means of protecting brassica crops from Plasmodiphora brassicae Wor., (clubroot)

(2015) Michael Mattey et al.   CROP PROTECTION

Phytoremediation of Metal Contaminated Soil Using Willow: Exploiting Plant-Associated Bacteria to Improve Biomass Production and Metal Uptake

(2015) Jolien Janssen et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

Stability and succession of the rhizosphere microbiota depends upon plant type and soil composition

(2015) Andrzej Tkacz et al.   ISME Journal

Prospecting cold deserts of north western Himalayas for microbial diversity and plant growth promoting attributes

(2015) Ajar Nath Yadav et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Specific Microbial Attachment to Root Knot Nematodes in Suppressive Soil

(2014) M. Adam et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial networks and co-occurrence relationships in the lettuce root microbiota

(2014) Massimiliano Cardinale et al.   ENVIRONMENTAL MICROBIOLOGY

Root microbiome relates to plant host evolution in maize and other Poaceae

(2014) Marie-Lara Bouffaud et al.   ENVIRONMENTAL MICROBIOLOGY

Growth stimulation of barley and biocontrol effect on plant pathogenic fungi by a Cellulosimicrobium sp. strain isolated from salt-affected rhizosphere soil in northwestern Algeria

(2014) Elhafid Nabti et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Design and Experimental Application of a Novel Non-Degenerate Universal Primer Set that Amplifies Prokaryotic 16S rRNA Genes with a Low Possibility to Amplify Eukaryotic rRNA Genes

(2013) H. Mori et al.   DNA RESEARCH

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

(2013) Saraswoti Neupane et al.   Standards in Genomic Sciences

Diversity and Antimicrobial Properties of Lactic Acid Bacteria Isolated from Rhizosphere of Olive Trees and Desert Truffles of Tunisia

(2013) Imene Fhoula et al.   Biomed Research International

Bacteria from the rhizosphere and roots ofBrassica napusinfluence its root growth promotion byPhyllobacterium brassicacearum

(2013) Marièle Larcher et al.   ACTA BOTANICA GALLICA

Bacterial communities associated withBrassica napus L. grown on trace element-contaminated and non-contaminated fields: a genotypic and phenotypic comparison

(2013) S. Croes et al.   Microbial Biotechnology

Phytohormone production and colonization of canola (Brassica napus L.) roots by Pseudomonas fluorescens 6-8 under gnotobiotic conditions

(2012) Rajash Pallai et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

(2012) Matthew G. Bakker et al.   PLANT AND SOIL

Aerococcus sp. with an antimycobacterial effect

(2011) Ilham Zahir   AFRICAN JOURNAL OF BIOTECHNOLOGY

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

(2010) James H Bullard et al.   BMC BIOINFORMATICS

Characterization of arsenic-resistant bacteria from the rhizosphere of arsenic hyperaccumulator Pteris vittata

(2010) Anhui Huang et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Shinella daejeonensis sp. nov., a nitrate-reducing bacterium isolated from sludge of a leachate treatment plant

(2010) M. Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The role of Variovorax and other Comamonadaceae in sulfur transformations by microbial wheat rhizosphere communities exposed to different sulfur fertilization regimes

(2008) Achim Schmalenberger et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial ectosymbionts and virulence silencing in a Fusarium oxysporum strain

(2008) Daniela Minerdi et al.   ENVIRONMENTAL MICROBIOLOGY