The Composition and Phosphorus Cycling Potential of Bacterial Communities Associated With Hyphae of Penicillium in Soil Are Strongly Affected by Soil Origin

Host genetic variation strongly influences the microbiome structure and function in fungal fruiting-bodies

(2018) Mari Pent et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial microbiomes of individual ectomycorrhizal Pinus sylvestris roots are shaped by soil horizon and differentially sensitive to nitrogen addition

(2017) Srisailam Marupakula et al.   ENVIRONMENTAL MICROBIOLOGY

Land-use influences phosphatase gene microdiversity in soils

(2017) Andrew L. Neal et al.   ENVIRONMENTAL MICROBIOLOGY

Long-term P and K fertilisation strategies and balances affect soil availability indices, crop yield depression risk and N use

(2017) Frederik van der Bom et al.   EUROPEAN JOURNAL OF AGRONOMY

A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil

(2017) Behnoushsadat Ghodsalavi et al.   PLoS One

Bacterial selection by mycospheres of Atlantic Rainforest mushrooms

(2016) Joshua Andrew Halsey et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Bacterial alkaline phosphomonoesterase in the rhizospheres of plants grown in Chilean extreme environments

(2016) Jacquelinne J. Acuña et al.   BIOLOGY AND FERTILITY OF SOILS

In situstable isotope probing of phosphate-solubilizing bacteria in the hyphosphere

(2016) Fei Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Root nodule symbiosis inLotus japonicusdrives the establishment of distinctive rhizosphere, root, and nodule bacterial communities

(2016) Rafal Zgadzaj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arbuscular mycorrhizal hyphae in grassland select for a diverse and abundant hyphospheric bacterial community involved in sulfonate desulfurization

(2015) Jacinta Gahan et al.   APPLIED SOIL ECOLOGY

Analysis of single root tip microbiomes suggests that distinctive bacterial communities are selected by P inus sylvestris roots colonized by different ectomycorrhizal fungi

(2015) Srisailam Marupakula et al.   ENVIRONMENTAL MICROBIOLOGY

Baiting of rhizosphere bacteria with hyphae of common soil fungi reveals a diverse group of potentially mycophagous secondary consumers

(2015) M.B. Rudnick et al.   SOIL BIOLOGY & BIOCHEMISTRY

Methods for Baiting and Enriching Fungus-Feeding (Mycophagous) Rhizosphere Bacteria

(2015) Max-Bernhard Ballhausen et al.   Frontiers in Microbiology

Harnessing phytomicrobiome signaling for rhizosphere microbiome engineering

(2015) Liliana Quiza et al.   Frontiers in Plant Science

Hyphosphere interactions between an arbuscular mycorrhizal fungus and a phosphate solubilizing bacterium promote phytate mineralization in soil

(2014) Lin Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Isolation and characterization of a mycorrhiza helper bacterium from rhizosphere soils of poplar stands

(2013) Liu Zhao et al.   BIOLOGY AND FERTILITY OF SOILS

An arbuscular mycorrhizal fungus significantly modifies the soil bacterial community and nitrogen cycling during litter decomposition

(2013) Erin E. Nuccio et al.   ENVIRONMENTAL MICROBIOLOGY

Linkage between bacterial and fungal rhizosphere communities in hydrocarbon-contaminated soils is related to plant phylogeny

(2013) Terrence H Bell et al.   ISME Journal

Modeling digestibility of dietary phosphorus in growing and finish pigs1

(2013) V. Symeou et al.   JOURNAL OF ANIMAL SCIENCE

Organophosphonates revealed: new insights into the microbial metabolism of ancient molecules

(2013) John W. McGrath et al.   NATURE REVIEWS MICROBIOLOGY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Diversity and abundance of phosphonate biosynthetic genes in nature

(2013) X. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improving Griffith's protocol for co-extraction of microbial DNA and RNA in adsorptive soils

(2013) Mélanie M. Paulin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mycorrhizal hyphae as ecological niche for highly specialized hypersymbionts – or just soil free-riders?

(2013) Jan Jansa et al.   Frontiers in Plant Science

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India

(2012) Basit Yousuf et al.   BMC MICROBIOLOGY

Ectomycorrhizal hyphae structure components of the soil bacterial community for decreased phosphatase production

(2011) Denise D. Brooks et al.   FEMS MICROBIOLOGY ECOLOGY

Salmonella Biofilm Formation on Aspergillus niger Involves Cellulose – Chitin Interactions

(2011) Maria T. Brandl et al.   PLoS One

Long term impact of mineral amendment on the distribution of the mineral weathering associated bacterial communities from the beech Scleroderma citrinum ectomycorrhizosphere

(2011) S. Uroz et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil

(2011) Shoko Furuno et al.   Microbial Biotechnology

Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi

(2010) Tanja R Scheublin et al.   ISME Journal

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2

(2010) B. Drigo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biosynthesis of Phosphonic and Phosphinic Acid Natural Products

(2009) William W. Metcalf et al.   Annual Review of Biochemistry

Selection of Sphingomonadaceae at the Base of Laccaria proxima and Russula exalbicans Fruiting Bodies

(2009) F. G. H. Boersma et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

(2009) J. Rousk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mechanisms that promote bacterial fitness in fungal-affected soil microhabitats

(2009) Rashid Nazir et al.   FEMS MICROBIOLOGY ECOLOGY

A microbial source of phosphonates in oligotrophic marine systems

(2009) Sonya T. Dyhrman et al.   Nature Geoscience

Subcellular localization of marine bacterial alkaline phosphatases

(2009) Haiwei Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Potential to improve root access to phosphorus: the role of non-symbiotic microbial inoculants in the rhizosphere

(2009) P. R. Harvey et al.   Crop & Pasture Science

Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved?

(2008) Jan Aaldrik Warmink et al.   ISME Journal