Crl activates transcription by stabilizing active conformation of the master stress transcription initiation factor

Structural basis for transcription initiation by bacterial ECF σ factors

(2019) Lingting Li et al.   Nature Communications

Structural basis of ECF-σ-factor-dependent transcription initiation

(2019) Wei Lin et al.   Nature Communications

Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments

(2019) Glenn R. Masson et al.   NATURE METHODS

Structural basis for transcription activation by Crl through tethering of σS and RNA polymerase

(2019) Alexis Jaramillo Cartagena et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA

(2018) Xiaoxian Wu et al.   NUCLEIC ACIDS RESEARCH

New tools for automated high-resolution cryo-EM structure determination in RELION-3

(2018) Jasenko Zivanov et al.   eLife

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

(2017) Shawn Q Zheng et al.   NATURE METHODS

RNA polymerase motions during promoter melting

(2017) Andrey Feklistov et al.   SCIENCE

The Mediator Complex: At the Nexus of RNA Polymerase II Transcription

(2017) Célia Jeronimo et al.   TRENDS IN CELL BIOLOGY

Structural basis of transcription arrest by coliphage HK022 Nun in an Escherichia coli RNA polymerase elongation complex

(2017) Jin Young Kang et al.   eLife

Structure and function of the mycobacterial transcription initiation complex with the essential regulator RbpA

(2017) Elizabeth A Hubin et al.   eLife

A pipeline approach to single-particle processing inRELION

(2017) Rafael Fernandez-Leiro et al.   Acta Crystallographica Section D-Structural Biology

Local and global regulation of transcription initiation in bacteria

(2016) Douglas F. Browning et al.   NATURE REVIEWS MICROBIOLOGY

Structures ofE.coliσS-transcription initiation complexes provide new insights into polymerase mechanism

(2016) Bin Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Contribution of Stress Responses to Antibiotic Tolerance in Pseudomonas aeruginosa Biofilms

(2015) Philip S. Stewart et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The bacterial cell cycle regulator GcrA is a σ70cofactor that drives gene expression from a subset of methylated promoters

(2015) Diane L. Haakonsen et al.   GENES & DEVELOPMENT

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

(2015) Alexis Rohou et al.   JOURNAL OF STRUCTURAL BIOLOGY

Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA

(2015) Elizabeth A. Hubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Binding interface between the Salmonella σS/RpoS subunit of RNA polymerase and Crl: hints from bacterial species lacking crl

(2015) Paola Cavaliere et al.   Scientific Reports

Ranking of persister genes in the same Escherichia coli genetic background demonstrates varying importance of individual persister genes in tolerance to different antibiotics

(2015) Nan Wu et al.   Frontiers in Microbiology

Bacterial Sigma Factors: A Historical, Structural, and Genomic Perspective

(2014) Andrey Feklístov et al.   Annual Review of Microbiology

Structural and functional features of Crl proteins and identification of conserved surface residues required for interaction with the RpoS/σSsubunit of RNA polymerase

(2014) Paola Cavaliere et al.   BIOCHEMICAL JOURNAL

Structure of the RNA Polymerase Assembly Factor Crl and Identification of Its Interaction Surface with Sigma S

(2014) A. B. Banta et al.   JOURNAL OF BACTERIOLOGY

Structural basis for −10 promoter element melting by environmentally induced sigma factors

(2014) Sébastien Campagne et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Mycobacterium tuberculosisRNA Polymerase-binding Protein A (RbpA) and Its Interactions with Sigma Factors

(2013) Alessio Bortoluzzi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Key features of  S required for specific recognition by Crl, a transcription factor promoting assembly of RNA polymerase holoenzyme

(2013) A. B. Banta et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA Binding of the Cell Cycle Transcriptional Regulator GcrA Depends on N6-Adenosine Methylation in Caulobacter crescentus and Other Alphaproteobacteria

(2013) Antonella Fioravanti et al.   PLoS Genetics

Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the σ A -containing RNA polymerase holoenzyme

(2012) Yangbo Hu et al.   NUCLEIC ACIDS RESEARCH

Chlamydia trachomatis protein GrgA activates transcription by contacting the nonconserved region of  66

(2012) X. Bao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural Basis of Transcription Initiation

(2012) Y. Zhang et al.   SCIENCE

Outcome of the First Electron Microscopy Validation Task Force Meeting

(2012) Richard Henderson et al.   STRUCTURE

In vitro transcription profiling of the σ S subunit of bacterial RNA polymerase: re-definition of the σ S regulon and identification of σ S -specific promoter sequence elements

(2011) Anna Maciąg et al.   NUCLEIC ACIDS RESEARCH

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Regulation of Alternative Sigma Factor Use

(2010) Sofia Österberg et al.   Annual Review of Microbiology

The RpoS-Mediated General Stress Response inEscherichia coli

(2010) Aurelia Battesti et al.   Annual Review of Microbiology

Crl Binds to Domain 2 of  S and Confers a Competitive Advantage on a Natural rpoS Mutant of Salmonella enterica Serovar Typhi

(2010) V. Monteil et al.   JOURNAL OF BACTERIOLOGY

Identification of Conserved Amino Acid Residues of the Salmonella  S Chaperone Crl Involved in Crl- S Interactions

(2009) V. Monteil et al.   JOURNAL OF BACTERIOLOGY

Three-dimensional EM structure of an intact activator-dependent transcription initiation complex

(2009) B. P. Hudson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of Global Regulators and Nucleotide Metabolism in Antibiotic Tolerance in Escherichia coli

(2008) S. Hansen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Effect of Growth Temperature on Crl-Dependent Regulation of  S Activity in Salmonella enterica Serovar Typhimurium

(2008) V. Robbe-Saule et al.   JOURNAL OF BACTERIOLOGY

Binding of the Unorthodox Transcription Activator, Crl, to the Components of the Transcription Machinery

(2008) Patrick England et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Analysis of RNA polymerase-promoter complex formation

(2008) Wilma Ross et al.   METHODS