L-HetNetAligner: A novel algorithm for Local Alignment of Heterogeneous Biological Networks
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
L-HetNetAligner: A novel algorithm for Local Alignment of Heterogeneous Biological Networks
Authors
Keywords
-
Journal
Scientific Reports
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-03-03
DOI
10.1038/s41598-020-60737-5
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- ClueNet: Clustering a temporal network based on topological similarity rather than denseness
- (2018) Joseph Crawford et al. PLoS One
- From homogeneous to heterogeneous network alignment via colored graphlets
- (2018) Shawn Gu et al. Scientific Reports
- Multiple network alignment via multiMAGNA++
- (2017) Vipin Vijayan et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- Network propagation: a universal amplifier of genetic associations
- (2017) Lenore Cowen et al. NATURE REVIEWS GENETICS
- Network approaches and applications in biology
- (2017) Trey Ideker et al. PLoS Computational Biology
- Systematic integration of biomedical knowledge prioritizes drugs for repurposing
- (2017) Daniel Scott Himmelstein et al. eLife
- ProphTools: general prioritization tools for heterogeneous biological networks
- (2017) Carmen Navarro et al. GigaScience
- Unified Alignment of Protein-Protein Interaction Networks
- (2017) Noël Malod-Dognin et al. Scientific Reports
- Exploring the structure and function of temporal networks with dynamic graphlets
- (2016) Y. Hulovatyy et al. BIOINFORMATICS
- Local versus global biological network alignment
- (2016) Lei Meng et al. BIOINFORMATICS
- Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model
- (2016) Jingchao Ni et al. BMC BIOINFORMATICS
- Integrative methods for analyzing big data in precision medicine
- (2016) Vladimir Gligorijević et al. PROTEOMICS
- Mining Dual Networks
- (2016) Yubao WU et al. ACM Transactions on Knowledge Discovery from Data
- MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation
- (2015) V. Vijayan et al. BIOINFORMATICS
- L-GRAAL: Lagrangian graphlet-based network aligner
- (2015) Noël Malod-Dognin et al. BIOINFORMATICS
- Understanding multicellular function and disease with human tissue-specific networks
- (2015) Casey S Greene et al. NATURE GENETICS
- Tissue-aware data integration approach for the inference of pathway interactions in metazoan organisms
- (2014) Christopher Y. Park et al. BIOINFORMATICS
- LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks
- (2014) Jialu Hu et al. BIOINFORMATICS
- MAGNA: Maximizing Accuracy in Global Network Alignment
- (2014) Vikram Saraph et al. BIOINFORMATICS
- A comparison of algorithms for the pairwise alignment of biological networks
- (2014) Connor Clark et al. BIOINFORMATICS
- Improving the Robustness of Local Network Alignment: Design and Extensive Assessmentof a Markov Clustering-Based Approach
- (2014) Marco Mina et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- The semantic measures library and toolkit: fast computation of semantic similarity and relatedness using biomedical ontologies
- (2013) S. Harispe et al. BIOINFORMATICS
- Integrative approaches for finding modular structure in biological networks
- (2013) Koyel Mitra et al. NATURE REVIEWS GENETICS
- Global network alignment using multiscale spectral signatures
- (2012) R. Patro et al. BIOINFORMATICS
- C-GRAAL: Common-neighbors-based global GRAph ALignment of biological networks
- (2012) Vesna Memišević et al. Integrative Biology
- A Novel Framework for the Comparative Analysis of Biological Networks
- (2012) Roland A. Pache et al. PLoS One
- AlignNemo: A Local Network Alignment Method to Integrate Homology and Topology
- (2012) Giovanni Ciriello et al. PLoS One
- Integrative network alignment reveals large regions of global network similarity in yeast and human
- (2011) Oleksii Kuchaiev et al. BIOINFORMATICS
- Semantic similarity analysis of protein data: assessment with biological features and issues
- (2011) P. H. Guzzi et al. BRIEFINGS IN BIOINFORMATICS
- Protein-to-protein interactions
- (2010) Mario Cannataro et al. ACM COMPUTING SURVEYS
- Network integration meets network dynamics
- (2010) Teresa M Przytycka et al. BMC BIOLOGY
- The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
- (2010) D. Szklarczyk et al. NUCLEIC ACIDS RESEARCH
- IsoRankN: spectral methods for global alignment of multiple protein networks
- (2009) C.-S. Liao et al. BIOINFORMATICS
- Automatic Parameter Learning for Multiple Local Network Alignment
- (2009) Jason Flannick et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Community detection in graphs
- (2009) Santo Fortunato PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS
- GraphWeb: mining heterogeneous biological networks for gene modules with functional significance
- (2008) J. Reimand et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started