Tentacle Transcriptomes of the Speckled Anemone (Actiniaria: Actiniidae: Oulactis sp.): Venom-Related Components and Their Domain Structure

Transcriptomic and Proteomic Analysis of the Tentacles and Mucus of Anthopleura dowii Verrill, 1869

(2019) Santos Ramírez-Carreto et al.   Marine Drugs

Mapping the chemical and sequence space of the ShKT superfamily

(2019) Thomas Shafee et al.   TOXICON

Peptide therapeutics from venom: Current status and potential

(2018) Michael W. Pennington et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Peptide fingerprinting of the sea anemone Heteractis magnifica mucus revealed neurotoxins, Kunitz-type proteinase inhibitors and a new β-defensin α-amylase inhibitor

(2018) Oksana Sintsova et al.   Journal of Proteomics

Structure, folding and stability of a minimal homologue from Anemonia sulcata of the sea anemone potassium channel blocker ShK

(2018) Bankala Krishnarjuna et al.   PEPTIDES

Synthesis, folding, structure and activity of a predicted peptide from the sea anemone Oulactis sp. with an ShKT fold

(2018) Bankala Krishnarjuna et al.   TOXICON

Stichodactyla helianthus ' de novo transcriptome assembly: Discovery of a new actinoporin isoform

(2018) Esperanza Rivera-de-Torre et al.   TOXICON

Sea Anemones: Quiet Achievers in the Field of Peptide Toxins

(2018) Peter J. Prentis et al.   Toxins

Dynamics of venom composition across a complex life cycle

(2018) Yaara Y Columbus-Shenkar et al.   eLife

Revisiting venom of the sea anemone Stichodactyla haddoni : Omics techniques reveal the complete toxin arsenal of a well-studied sea anemone genus

(2017) Bruno Madio et al.   Journal of Proteomics

SMS: Smart Model Selection in PhyML

(2017) Vincent Lefort et al.   MOLECULAR BIOLOGY AND EVOLUTION

Salmon provides fast and bias-aware quantification of transcript expression

(2017) Rob Patro et al.   NATURE METHODS

Acid-sensing ion channel (ASIC) structure and function: Insights from spider, snake and sea anemone venoms

(2017) Ben Cristofori-Armstrong et al.   NEUROPHARMACOLOGY

A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors

(2017) Donald M. Bryant et al.   Cell Reports

New Disulfide-Stabilized Fold Provides Sea Anemone Peptide to Exhibit Both Antimicrobial and TRPA1 Potentiating Properties

(2017) Yulia A. Logashina et al.   Toxins

Safety and pharmacodynamics of dalazatide, a Kv1.3 channel inhibitor, in the treatment of plaque psoriasis: A randomized phase 1b trial

(2017) Eric J. Tarcha et al.   PLoS One

A single-point mutation enhances dual functionality of a scorpion toxin

(2016) Xueli Wang et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

Tissue-Specific Venom Composition and Differential Gene Expression in Sea Anemones

(2016) Jason Macrander et al.   Genome Biology and Evolution

Kunitz-Type Peptide HCRG21 from the Sea Anemone Heteractis crispa Is a Full Antagonist of the TRPV1 Receptor

(2016) Margarita Monastyrnaya et al.   Marine Drugs

Evolution of the Cytolytic Pore-Forming Proteins (Actinoporins) in Sea Anemones

(2016) Jason Macrander et al.   Toxins

Tentacle Transcriptome and Venom Proteome of the Pacific Sea Nettle, Chrysaora fuscescens (Cnidaria: Scyphozoa)

(2016) Dalia Ponce et al.   Toxins

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

The Mucus of Actinia equina (Anthozoa, Cnidaria): An Unexplored Resource for Potential Applicative Purposes

(2015) Loredana Stabili et al.   Marine Drugs

Multi-copy venom genes hidden in de novo transcriptome assemblies, a cautionary tale with the snakelocks sea anemone Anemonia sulcata (Pennant, 1977)

(2015) Jason Macrander et al.   TOXICON

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads

(2014) Y. Xie et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Jellyfish venomics and venom gland transcriptomics analysis of Stomolophus meleagris to reveal the toxins associated with sting

(2014) Rongfeng Li et al.   Journal of Proteomics

Dose and time dependence of box jellyfish antivenom

(2014) Athena Andreosso et al.   JOURNAL OF VENOMOUS ANIMALS AND TOXINS INCLUDING TROPICAL DISEASES

Evolution of separate predation- and defence-evoked venoms in carnivorous cone snails

(2014) Sébastien Dutertre et al.   Nature Communications

Optimizing de novo assembly of short-read RNA-seq data for phylogenomics

(2013) Ya Yang et al.   BMC GENOMICS

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

A novel sea anemone peptide that inhibits acid-sensing ion channels

(2013) Armando Alexei Rodríguez et al.   PEPTIDES

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

A natural point mutation changes both target selectivity and mechanism of action of sea anemone toxins

(2012) Steve Peigneur et al.   FASEB JOURNAL

Effect of Point Mutations on the Secondary Structure and Membrane Interaction of Antimicrobial Peptide Anoplin

(2011) Amy Won et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension

(2011) P. Di Tommaso et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Neurotoxin localization to ectodermal gland cells uncovers an alternative mechanism of venom delivery in sea anemones

(2011) Y. Moran et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Enzymatic and structural characterization of a basic phospholipase A2 from the sea anemone Condylactis gigantea

(2010) Lazara Romero et al.   BIOCHIMIE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Snake Population Venomics: Proteomics-Based Analyses of Individual Variation Reveals Significant Gene Regulation Effects on Venom Protein Expression in Sistrurus Rattlesnakes

(2009) H. Lisle Gibbs et al.   JOURNAL OF MOLECULAR EVOLUTION

Universal sample preparation method for proteome analysis

(2009) Jacek R Wiśniewski et al.   NATURE METHODS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH