Transcriptome profiling analysis for two Tibetan wild barley genotypes in responses to low nitrogen

RNA-Seq analysis identifies genes associated with differential reproductive success under drought-stress in accessions of wild barley Hordeum spontaneum

(2015) Sariel Hübner et al.   BMC PLANT BIOLOGY

RNA-Seq analysis of differentially expressed genes in rice under varied nitrogen supplies

(2015) Shun-ying Yang et al.   GENE

Identification of the proteins associated with low potassium tolerance in cultivated and Tibetan wild barley

(2015) Jianbin Zeng et al.   Journal of Proteomics

RNA-seq reveals regional differences in transcriptome response to heat stress in the marine snailChlorostoma funebralis

(2015) Lani U. Gleason et al.   MOLECULAR ECOLOGY

Physiological and biochemical responses to drought stress in cultivated and Tibetan wild barley

(2015) Mian Zhang et al.   PLANT GROWTH REGULATION

Identification of differentially expressed genes between sorghum genotypes with contrasting nitrogen stress tolerance by genome-wide transcriptional profiling

(2014) Malleswari Gelli et al.   BMC GENOMICS

RNA-Seq-Based Transcriptome Profiling of Early Nitrogen Deficiency Response in Cucumber Seedlings Provides New Insight into the Putative Nitrogen Regulatory Network

(2014) Wenchao Zhao et al.   PLANT AND CELL PHYSIOLOGY

The Arabidopsis nitrate transporter NRT2.5 plays a role in nitrate acquisition and remobilization in nitrogen-starved plants

(2014) Lina Lezhneva et al.   PLANT JOURNAL

Comparative Transcriptome Profiling of Two Tibetan Wild Barley Genotypes in Responses to Low Potassium

(2014) Jianbin Zeng et al.   PLoS One

Ionomic Responses and Correlations Between Elements and Metabolites Under Salt Stress in Wild and Cultivated Barley

(2013) Dezhi Wu et al.   PLANT AND CELL PHYSIOLOGY

Nitrogen acquisition by roots: physiological and developmental mechanisms ensuring plant adaptation to a fluctuating resource

(2013) Philippe Nacry et al.   PLANT AND SOIL

The nitrate transporter NRT2.1 functions in the ethylene response to nitrate deficiency inArabidopsis

(2013) DONGCHAO ZHENG et al.   PLANT CELL AND ENVIRONMENT

Transcriptome response to nitrogen starvation in rice

(2012) Hongmei Cai et al.   JOURNAL OF BIOSCIENCES

Exploring NUE in crops and in Arabidopsis ideotypes to improve yield and seed quality

(2012) Fabien Chardon et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Arabidopsis Nitrate Transporter NRT2.4 Plays a Double Role in Roots and Shoots of Nitrogen-Starved Plants

(2012) T. Kiba et al.   PLANT CELL

Tibet is one of the centers of domestication of cultivated barley

(2012) F. Dai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin and Ethylene Induce Flavonol Accumulation through Distinct Transcriptional Networks

(2011) D. R. Lewis et al.   PLANT PHYSIOLOGY

Nitrogen economics of root foraging: Transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand

(2011) S. Ruffel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diversification of P450 Genes During Land Plant Evolution

(2010) Masaharu Mizutani et al.   Annual Review of Plant Biology

Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions

(2010) Adriano Nunes-Nesi et al.   Molecular Plant

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Recent insights into antioxidant defenses of legume root nodules

(2010) Manuel Becana et al.   NEW PHYTOLOGIST

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Genetic variations in dry matter production and physiological nitrogen use efficiency in rice (Oryza sativa L.) varieties

(2009) Sachiko Namai et al.   BREEDING SCIENCE

Environmental perception avenues: the interaction of cytokinin and environmental response pathways

(2009) CRISTIANA T. ARGUESO et al.   PLANT CELL AND ENVIRONMENT

R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae

(2009) S. Imamura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Adaptation of Arabidopsis to nitrogen limitation involves induction of anthocyanin synthesis which is controlled by the NLA gene

(2008) M. Peng et al.   JOURNAL OF EXPERIMENTAL BOTANY

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols