Insights into the innate immunome of actiniarians using a comparative genomic approach
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Insights into the innate immunome of actiniarians using a comparative genomic approach
Authors
Keywords
Actiniaria, Innate immune system, Transcriptomics, Evolution, TIR domain, NLR, Novel immune genes, Complement cascade, CniFL
Journal
BMC GENOMICS
Volume 17, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-11-02
DOI
10.1186/s12864-016-3204-2
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Diversity of animal immune receptors and the origins of recognition complexity in the deuterostomes
- (2015) Katherine M. Buckley et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- The genome ofAiptasia, a sea anemone model for coral symbiosis
- (2015) Sebastian Baumgarten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparative Analysis and Distribution of Omega-3 lcPUFA Biosynthesis Genes in Marine Molluscs
- (2015) Joachim M. Surm et al. PLoS One
- Massive expansion and functional divergence of innate immune genes in a protostome
- (2015) Linlin Zhang et al. Scientific Reports
- UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches
- (2014) B. E. Suzek et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- TIR-domain-containing protein repertoire of nine anthozoan species reveals coral–specific expansions and uncharacterized proteins
- (2014) Angela Z. Poole et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- The Anadara trapezia transcriptome: A resource for molluscan physiological genomics
- (2014) Peter J. Prentis et al. Marine Genomics
- SMART: recent updates, new developments and status in 2015
- (2014) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- UniProt: a hub for protein information
- (2014) NUCLEIC ACIDS RESEARCH
- Cnidarian-Microbe Interactions and the Origin of Innate Immunity in Metazoans
- (2013) Thomas C.G. Bosch Annual Review of Microbiology
- The Characterization of Sponge NLRs Provides Insight into the Origin and Evolution of This Innate Immune Gene Family in Animals
- (2013) Benedict Yuen et al. MOLECULAR BIOLOGY AND EVOLUTION
- PAMLX: A Graphical User Interface for PAML
- (2013) B. Xu et al. MOLECULAR BIOLOGY AND EVOLUTION
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
- (2012) Jian Ye et al. BMC BIOINFORMATICS
- Cell Biology of Cnidarian-Dinoflagellate Symbiosis
- (2012) S. K. Davy et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- The Complex NOD-Like Receptor Repertoire of the Coral Acropora digitifera Includes Novel Domain Combinations
- (2012) Mayuko Hamada et al. MOLECULAR BIOLOGY AND EVOLUTION
- The oyster genome reveals stress adaptation and complexity of shell formation
- (2012) Guofan Zhang et al. NATURE
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers
- (2012) S. Franzenburg et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- Domain combination of the vertebrate-like TLR gene family: implications for their origin and evolution
- (2011) BAOJUN WU et al. JOURNAL OF GENETICS
- Using the Acropora digitifera genome to understand coral responses to environmental change
- (2011) Chuya Shinzato et al. NATURE
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- SignalP 4.0: discriminating signal peptides from transmembrane regions
- (2011) Thomas Nordahl Petersen et al. NATURE METHODS
- Massively parallel sequencing and analysis of expressed sequence tags in a successful invasive plant
- (2010) Peter J. Prentis et al. ANNALS OF BOTANY
- The genome of the sponge Amphimedon queenslandica provides new perspectives into the origin of Toll-like and interleukin 1 receptor pathways
- (2010) Marie E. A. Gauthier et al. EVOLUTION & DEVELOPMENT
- Domain architecture evolution of pattern-recognition receptors
- (2010) Qing Zhang et al. IMMUNOGENETICS
- Defining the Origins of the NOD-Like Receptor System at the Base of Animal Evolution
- (2010) C. Lange et al. MOLECULAR BIOLOGY AND EVOLUTION
- The dynamic genome of Hydra
- (2010) Jarrod A. Chapman et al. NATURE
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- The roles of TLRs, RLRs and NLRs in pathogen recognition
- (2009) T. Kawai et al. INTERNATIONAL IMMUNOLOGY
- Origin and evolution of the adaptive immune system: genetic events and selective pressures
- (2009) Martin F. Flajnik et al. NATURE REVIEWS GENETICS
- Two Alleles of NF-κB in the Sea Anemone Nematostella vectensis Are Widely Dispersed in Nature and Encode Proteins with Distinct Activities
- (2009) James C. Sullivan et al. PLoS One
- How Hydra senses and destroys microbes
- (2009) René Augustin et al. SEMINARS IN IMMUNOLOGY
- Uncovering the evolutionary history of innate immunity: The simple metazoan Hydra uses epithelial cells for host defence
- (2008) Thomas C.G. Bosch et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- The NLR Gene Family: A Standard Nomenclature
- (2008) Jenny P.-Y. Ting et al. IMMUNITY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now