Horizontal gene transfer of acetyltransferases, invertases and chorismate mutases from different bacteria to diverse recipients

Horizontal Gene Transfer from Bacteria Has Enabled the Plant-Parasitic NematodeGlobodera pallidato Feed on Host-Derived Sucrose

(2016) Etienne G.J. Danchin et al.   MOLECULAR BIOLOGY AND EVOLUTION

The plant parasite Pratylenchus coffeaecarries a minimal nematode genome

(2015) Mark Burke et al.   NEMATOLOGY

Eighteen New Candidate Effectors of the Phytonematode Heterodera glycines Produced Specifically in the Secretory Esophageal Gland Cells During Parasitism

(2015) Jason B. Noon et al.   PHYTOPATHOLOGY

The Pratylenchus penetrans Transcriptome as a Source for the Development of Alternative Control Strategies: Mining for Putative Genes Involved in Parasitism and Evaluation of in planta RNAi

(2015) Paulo Vieira et al.   PLoS One

Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade

(2015) Thomas C. Boothby et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

The Transcriptome of Nacobbus aberrans Reveals Insights into the Evolution of Sedentary Endoparasitism in Plant-Parasitic Nematodes

(2014) Sebastian Eves-van den Akker et al.   Genome Biology and Evolution

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

The InterPro protein families database: the classification resource after 15 years

(2014) Alex Mitchell et al.   NUCLEIC ACIDS RESEARCH

Transcriptomic Analysis of the Rice White Tip Nematode, Aphelenchoides besseyi (Nematoda: Aphelenchoididae)

(2014) Feng Wang et al.   PLoS One

De Novo Transcriptome Sequencing and Analysis of the Cereal Cyst Nematode, Heterodera avenae

(2014) Mukesh Kumar et al.   PLoS One

The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode

(2014) James A Cotton et al.   GENOME BIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Analysis of the transcriptome ofHirschmanniella oryzaeto explore potential survival strategies and host-nematode interactions

(2013) Lander Bauters et al.   MOLECULAR PLANT PATHOLOGY

Nematode effector proteins: an emerging paradigm of parasitism

(2013) Melissa G. Mitchum et al.   NEW PHYTOLOGIST

Exploring the Host Parasitism of the Migratory Plant-Parasitic Nematode Ditylenchus destuctor by Expressed Sequence Tags Analysis

(2013) Huan Peng et al.   PLoS One

Hosts, parasites, and horizontal gene transfer

(2013) Bhagya K. Wijayawardena et al.   TRENDS IN PARASITOLOGY

NEMBASE4: The nematode transcriptome resource

(2011) Benjamin Elsworth et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Analysis of the transcriptome of the root lesion nematode Pratylenchus coffeae generated by 454 sequencing technology

(2011) Annelies Haegeman et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Horizontal Gene Transfer in Nematodes: A Catalyst for Plant Parasitism?

(2011) Annelies Haegeman et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Genomic Insights into the Origin of Parasitism in the Emerging Plant Pathogen Bursaphelenchus xylophilus

(2011) Taisei Kikuchi et al.   PLoS Pathogens

Chorismate mutase: an alternatively spliced parasitism gene and a diagnostic marker for three important Globodera nematode species

(2010) Hang Yu et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

A formal test of the theory of universal common ancestry

(2010) Douglas L. Theobald   NATURE

Toward a mechanistic understanding of competition in vascular-feeding herbivores: an empirical test of the sink competition hypothesis

(2010) Ian Kaplan et al.   OECOLOGIA

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

(2010) Etienne G. J. Danchin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae

(2009) Nurul Karim et al.   BMC GENOMICS

E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)

(2008) Pere Puigbò et al.   BMC BIOINFORMATICS

Analysis of a Horizontally Transferred Pathway Involved in Vitamin B6 Biosynthesis from the Soybean Cyst Nematode Heterodera glycines

(2008) J. P. Craig et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

(2008) Pierre Abad et al.   NATURE BIOTECHNOLOGY