The Pratylenchus penetrans Transcriptome as a Source for the Development of Alternative Control Strategies: Mining for Putative Genes Involved in Parasitism and Evaluation of in planta RNAi

Meloidogyne javanica fatty acid- and retinol-binding protein (Mj-FAR-1) regulates expression of lipid-, cell wall-, stress- and phenylpropanoid-related genes during nematode infection of tomato

(2015) Ionit Iberkleid et al.   BMC GENOMICS

The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families

(2015) Erich M Schwarz et al.   NATURE GENETICS

The plant parasite Pratylenchus coffeaecarries a minimal nematode genome

(2015) Mark Burke et al.   NEMATOLOGY

Only a small subset of the SPRY domain gene family in Globodera pallida is likely to encode effectors, two of which suppress host defences induced by the potato resistance gene Gpa2

(2015) Yuanyuan Mei et al.   NEMATOLOGY

The status of RNAi-based transgenic research in plant nematology

(2015) Tushar K. Dutta et al.   Frontiers in Microbiology

Molecular biology of root lesion nematodes (Pratylenchusspp.) and their interaction with host plants

(2014) M.G.K. Jones et al.   ANNALS OF APPLIED BIOLOGY

The Activation and Suppression of Plant Innate Immunity by Parasitic Nematodes

(2014) Aska Goverse et al.   Annual Review of Phytopathology

Root-lesion and root-knot nematodes parasitizing potato

(2014) Ivânia Esteves et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

The Transcriptome of Nacobbus aberrans Reveals Insights into the Evolution of Sedentary Endoparasitism in Plant-Parasitic Nematodes

(2014) Sebastian Eves-van den Akker et al.   Genome Biology and Evolution

Comparative Analysis of the Secretome from a Model Filarial Nematode (Litomosoides sigmodontis) Reveals Maximal Diversity in Gravid Female Parasites

(2014) Stuart D. Armstrong et al.   MOLECULAR & CELLULAR PROTEOMICS

Apoplastic Venom Allergen-like Proteins of Cyst Nematodes Modulate the Activation of Basal Plant Innate Immunity by Cell Surface Receptors

(2014) Jose L. Lozano-Torres et al.   PLoS Pathogens

The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode

(2014) James A Cotton et al.   GENOME BIOLOGY

Genetic mapping and marker development for resistance of wheat against the root lesion nematode Pratylenchus neglectus

(2013) Dimanthi V Jayatilake et al.   BMC PLANT BIOLOGY

Analysis of the transcriptome ofHirschmanniella oryzaeto explore potential survival strategies and host-nematode interactions

(2013) Lander Bauters et al.   MOLECULAR PLANT PATHOLOGY

Top 10 plant-parasitic nematodes in molecular plant pathology

(2013) John T. Jones et al.   MOLECULAR PLANT PATHOLOGY

Transcriptional silencing of RNAi constructs against nematode genes in Arabidopsis

(2013) Tina Kyndt et al.   NEMATOLOGY

The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus

(2013) Erich M Schwarz et al.   GENOME BIOLOGY

Rather than by direct acquisition via lateral gene transfer, GHF5 cellulases were passed on from early Pratylenchidae to root-knot and cyst nematodes

(2012) Katarzyna Rybarczyk-Mydłowska et al.   BMC EVOLUTIONARY BIOLOGY

Gene silencing in root lesion nematodes (Pratylenchus spp.) significantly reduces reproduction in a plant host

(2012) Jo-Anne C.H. Tan et al.   EXPERIMENTAL PARASITOLOGY

de novo analysis and functional classification of the transcriptome of the root lesion nematode, Pratylenchus thornei, after 454 GS FLX sequencing

(2012) Paul Nicol et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Molecular mechanisms of hookworm disease: Stealth, virulence, and vaccines

(2012) Mark S. Pearson et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

RNA interference in Pratylenchus coffeae: Knock down of Pc-pat-10 and Pc-unc-87 impedes migration

(2012) Soumi Joseph et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Identification of candidate effector genes in the transcriptome of the rice root knot nematodeMeloidogyne graminicola

(2012) Annelies Haegeman et al.   MOLECULAR PLANT PATHOLOGY

GenBank

(2012) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

NEMBASE4: The nematode transcriptome resource

(2011) Benjamin Elsworth et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Analysis of the transcriptome of the root lesion nematode Pratylenchus coffeae generated by 454 sequencing technology

(2011) Annelies Haegeman et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Simultaneous silencing of endo-β-1,4 xylanase genes reveals their roles in the virulence of Magnaporthe oryzae

(2011) Quoc Bao Nguyen et al.   MOLECULAR MICROBIOLOGY

Horizontal Gene Transfer in Nematodes: A Catalyst for Plant Parasitism?

(2011) Annelies Haegeman et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

QTL analysis of root-lesion nematode resistance in barley: 1. Pratylenchus neglectus

(2011) Shiveta Sharma et al.   THEORETICAL AND APPLIED GENETICS

RNAi Effector Diversity in Nematodes

(2011) Johnathan J. Dalzell et al.   PLoS Neglected Tropical Diseases

Genomic Insights into the Origin of Parasitism in the Emerging Plant Pathogen Bursaphelenchus xylophilus

(2011) Taisei Kikuchi et al.   PLoS Pathogens

A Helminth Immunomodulator Exploits Host Signaling Events to Regulate Cytokine Production in Macrophages

(2011) Christian Klotz et al.   PLoS Pathogens

Post-transcriptional gene silencing of root-knot nematode in transformed soybean roots

(2010) Heba M.M. Ibrahim et al.   EXPERIMENTAL PARASITOLOGY

CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database

(2010) Byung H Park et al.   GLYCOBIOLOGY

The plant apoplasm is an important recipient compartment for nematode secreted proteins

(2010) Paulo Vieira et al.   JOURNAL OF EXPERIMENTAL BOTANY

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

(2010) Etienne G. J. Danchin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterisation of a fatty acid and retinol binding protein orthologue from the hookworm Ancylostoma ceylanicum

(2009) Keke C. Fairfax et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

A nematode effector protein similar to annexins in host plants

(2009) N. Patel et al.   JOURNAL OF EXPERIMENTAL BOTANY

Characterization of a putative endoxylanase in the migratory plant-parasitic nematodeRadopholus similis

(2009) ANNELIES HAEGEMAN et al.   MOLECULAR PLANT PATHOLOGY

MEROPS: the peptidase database

(2009) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

The secretome of the filarial parasite, Brugia malayi: Proteomic profile of adult excretory–secretory products

(2008) James P. Hewitson et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

(2008) Pierre Abad et al.   NATURE BIOTECHNOLOGY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

(2008) C. H. Opperman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA