SoftPanel: a website for grouping diseases and related disorders for generation of customized panels

Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research

(2015) Àlex Bravo et al.   BMC BIOINFORMATICS

Phenotype-driven strategies for exome prioritization of human Mendelian disease genes

(2015) Damian Smedley et al.   Genome Medicine

ProSim: A Method for Prioritizing Disease Genes Based on Protein Proximity and Disease Similarity

(2015) Gamage Upeksha Ganegoda et al.   Biomed Research International

Computational Disease Gene Prioritization: An Appraisal

(2014) Nivit Gill et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

PhenoTips: Patient Phenotyping Software for Clinical and Research Use

(2013) Marta Girdea et al.   HUMAN MUTATION

Targeted Next-Generation Sequencing Panel (ThyroSeq) for Detection of Mutations in Thyroid Cancer

(2013) Marina N. Nikiforova et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

The Reactome pathway knowledgebase

(2013) David Croft et al.   NUCLEIC ACIDS RESEARCH

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Representation of rare diseases in health information systems: The orphanet approach to serve a wide range of end users

(2012) Ana Rath et al.   HUMAN MUTATION

Computational tools for prioritizing candidate genes: boosting disease gene discovery

(2012) Yves Moreau et al.   NATURE REVIEWS GENETICS

“Guilt by Association” Is the Exception Rather Than the Rule in Gene Networks

(2012) Jesse Gillis et al.   PLoS Computational Biology

Uncover disease genes by maximizing information flow in the phenome-interactome network

(2011) Y. Chen et al.   BIOINFORMATICS

Molecular signatures database (MSigDB) 3.0

(2011) A. Liberzon et al.   BIOINFORMATICS

Modularity-based credible prediction of disease genes and detection of disease subtypes on the phenotype-gene heterogeneous network

(2011) Xin Yao et al.   BMC Systems Biology

Exome sequencing as a tool for Mendelian disease gene discovery

(2011) Michael J. Bamshad et al.   NATURE REVIEWS GENETICS

PINA v2.0: mining interactome modules

(2011) Mark J. Cowley et al.   NUCLEIC ACIDS RESEARCH

Align human interactome with phenome to identify causative genes and networks underlying disease families

(2008) Xuebing Wu et al.   BIOINFORMATICS

iRefIndex: A consolidated protein interaction database with provenance

(2008) Sabry Razick et al.   BMC BIOINFORMATICS

ENDEAVOUR update: a web resource for gene prioritization in multiple species

(2008) L.-C. Tranchevent et al.   NUCLEIC ACIDS RESEARCH