Genome Wide Association Study and Genomic Selection of Amino Acid Concentrations in Soybean Seeds

Genome-wide association study (GWAS) of leaf cuticular wax components in Camelina sativa identifies genetic loci related to intracellular wax transport

(2019) Zinan Luo et al.   BMC PLANT BIOLOGY

Genome-wide association mapping for seed protein and oil contents using a large panel of soybean accessions

(2018) Dongmei Li et al.   GENOMICS

Genome-wide Scan for Seed Composition Provides Insights into Soybean Quality Improvement and the Impacts of Domestication and Breeding

(2018) Jiaoping Zhang et al.   Molecular Plant

Genome-wide association mapping of QTL underlying seed oil and protein contents of a diverse panel of soybean accessions

(2018) Ying-hui Li et al.   PLANT SCIENCE

Genotyping of Soybean Cultivars With Medium-Density Array Reveals the Population Structure and QTNs Underlying Maturity and Seed Traits

(2018) Ya-ying Wang et al.   Frontiers in Plant Science

Genome-Wide Association Study Identifying Candidate Genes Influencing Important Agronomic Traits of Flax (Linum usitatissimum L.) Using SLAF-seq

(2018) Dongwei Xie et al.   Frontiers in Plant Science

Molecular markers reliably predict post-harvest deterioration of fresh-cut lettuce in modified atmosphere packaging

(2018) Ivan Simko et al.   Horticulture Research

Genome-Wide Association Mapping of Host-Plant Resistance to Soybean Aphid

(2018) Anthony A. Hanson et al.   Plant Genome

Genome-Wide Association Studies of Free Amino Acid Levels by Six Multi-Locus Models in Bread Wheat

(2018) Yanchun Peng et al.   Frontiers in Plant Science

Genome-Wide Association Studies for Dynamic Plant Height and Number of Nodes on the Main Stem in Summer Sowing Soybeans

(2018) Fangguo Chang et al.   Frontiers in Plant Science

A Genome-Wide Association Study of Wheat Spike Related Traits in China

(2018) Jing Liu et al.   Frontiers in Plant Science

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci

(2017) Alina Ott et al.   NUCLEIC ACIDS RESEARCH

The genetic architecture of amino acids dissection by association and linkage analysis in maize

(2017) Min Deng et al.   PLANT BIOTECHNOLOGY JOURNAL

Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population

(2017) Xuecai Zhang et al.   G3-Genes Genomes Genetics

Genomic Selection for Drought Tolerance Using Genome-Wide SNPs in Maize

(2017) Mittal Shikha et al.   Frontiers in Plant Science

A Genome-Wide Association Study for Agronomic Traits in Soybean Using SNP Markers and SNP-Based Haplotype Analysis

(2017) Rodrigo Iván Contreras-Soto et al.   PLoS One

Genome-wide association mapping of resistance to Phytophthora sojae in a soybean [Glycine max (L.) Merr.] germplasm panel from maturity groups IV and V

(2017) Jun Qin et al.   PLoS One

Genetic diversity and population structure analysis of spinach by single-nucleotide polymorphisms identified through genotyping-by-sequencing

(2017) Ainong Shi et al.   PLoS One

Genome-wide SNP discovery and population structure analysis in pepper (Capsicum annuum) using genotyping by sequencing

(2016) F. Taranto et al.   BMC GENOMICS

Population structure analysis and association mapping of seed antioxidant content in USDA cowpea (Vigna unguiculata L. Walp.) core collection using SNPs

(2016) Jun Qin et al.   CANADIAN JOURNAL OF PLANT SCIENCE

Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice

(2016) Kenji Yano et al.   NATURE GENETICS

Network-Guided GWAS Improves Identification of Genes Affecting Free Amino Acids

(2016) Ruthie Angelovici et al.   PLANT PHYSIOLOGY

Genomic selection across multiple breeding cycles in applied bread wheat breeding

(2016) Sebastian Michel et al.   THEORETICAL AND APPLIED GENETICS

Assessing Predictive Properties of Genome-Wide Selection in Soybeans

(2016) Alencar Xavier et al.   G3-Genes Genomes Genetics

Prospects of Genomic Prediction in the USDA Soybean Germplasm Collection: Historical Data Creates Robust Models for Enhancing Selection of Accessions

(2016) Diego Jarquin et al.   G3-Genes Genomes Genetics

Genomic Selection for Processing and End-Use Quality Traits in the CIMMYT Spring Bread Wheat Breeding Program

(2016) Sarah D. Battenfield et al.   Plant Genome

GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction

(2016) You Tang et al.   Plant Genome

Establishment and Optimization of Genomic Selection to Accelerate the Domestication and Improvement of Intermediate Wheatgrass

(2016) Xiaofei Zhang et al.   Plant Genome

Association analysis of cowpea bacterial blight resistance in USDA cowpea germplasm

(2015) Ainong Shi et al.   EUPHYTICA

QTL for seed protein and amino acids in the Benning × Danbaekkong soybean population

(2015) C. V. Warrington et al.   THEORETICAL AND APPLIED GENETICS

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Genotyping by sequencing for genomic prediction in a soybean breeding population

(2014) Diego Jarquín et al.   BMC GENOMICS

An overview of SNP interactions in genome-wide association studies

(2014) P. Li et al.   Briefings in Functional Genomics

Accelerating the Switchgrass (Panicum virgatum L.) Breeding Cycle Using Genomic Selection Approaches

(2014) Alexander E. Lipka et al.   PLoS One

Exploring the areas of applicability of whole-genome prediction methods for Asian rice (Oryza sativa L.)

(2014) Akio Onogi et al.   THEORETICAL AND APPLIED GENETICS

Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding

(2014) Jiangfeng He et al.   Frontiers in Plant Science

The use of unbalanced historical data for genomic selection in an international wheat breeding program

(2013) Julie C. Dawson et al.   FIELD CROPS RESEARCH

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Development and Evaluation of SoySNP50K, a High-Density Genotyping Array for Soybean

(2013) Qijian Song et al.   PLoS One

An Improved Genotyping by Sequencing (GBS) Approach Offering Increased Versatility and Efficiency of SNP Discovery and Genotyping

(2013) Humira Sonah et al.   PLoS One

Impact of Marker Ascertainment Bias on Genomic Selection Accuracy and Estimates of Genetic Diversity

(2013) Nicolas Heslot et al.   PLoS One

Genomic Prediction of Northern Corn Leaf Blight Resistance in Maize with Combined or Separated Training Sets for Heterotic Groups

(2013) Frank Technow et al.   G3-Genes Genomes Genetics

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees

(2012) Marcos D. V. Resende et al.   NEW PHYTOLOGIST

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Selection in Wheat Breeding using Genotyping-by-Sequencing

(2012) Jesse Poland et al.   Plant Genome

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Genomic Selection Accuracy for Grain Quality Traits in Biparental Wheat Populations

(2011) Elliot L. Heffner et al.   CROP SCIENCE

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

From SNPs to Genes: Disease Association at the Gene Level

(2011) Benjamin Lehne et al.   PLoS One

Genome-based prediction of testcross values in maize

(2011) Theresa Albrecht et al.   THEORETICAL AND APPLIED GENETICS

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

QTL Mapping of Isoflavone, Oil and Protein Contents in Soybean (Glycine max L. Merr.)

(2010) Hui-zhen LIANG et al.   Agricultural Sciences in China

Genomic selection for durable stem rust resistance in wheat

(2010) Jessica E. Rutkoski et al.   EUPHYTICA

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Best Linear Unbiased Prediction of Genomic Breeding Values Using a Trait-Specific Marker-Derived Relationship Matrix

(2010) Zhe Zhang et al.   PLoS One

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

BIOMOD - a platform for ensemble forecasting of species distributions

(2009) Wilfried Thuiller et al.   ECOGRAPHY

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE