Influence of Various Processing Parameters on the Microbial Community Dynamics, Metabolomic Profiles, and Cup Quality During Wet Coffee Processing

Following Coffee Production from Cherries to Cup: Microbiological and Metabolomic Analysis of Wet Processing of Coffea arabica

(2019) Sophia Jiyuan Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Developing predictive models for determining physical properties of coffee beans during the roasting process

(2018) Jaime Daniel Bustos-Vanegas et al.   INDUSTRIAL CROPS AND PRODUCTS

On-line analysis of coffee roasting with ion mobility spectrometry–mass spectrometry (IMS–MS)

(2018) A.N. Gloess et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

Amplicon and shotgun metagenomic sequencing indicates that microbial ecosystems present in cheese brines reflect environmental inoculation during the cheese production process

(2018) Louise Vermote et al.   INTERNATIONAL DAIRY JOURNAL

Exploring the impacts of postharvest processing on the aroma formation of coffee beans – A review

(2018) Gilberto V. de Melo Pereira et al.   FOOD CHEMISTRY

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

Exploring the impact of post-harvest processing on the microbiota and metabolite profiles during a case of green coffee bean production

(2016) Florac De Bruyn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fermentative utilization of coffee mucilage using Bacillus coagulans and investigation of down-stream processing of fermentation broth for optically pure l(+)-lactic acid production

(2016) Anna-Katrin Neu et al.   BIORESOURCE TECHNOLOGY

Culture-Dependent and -Independent Methods to Investigate the Predominant Microorganisms Associated with Wet Processed Coffee

(2016) Xiaomin Feng et al.   CURRENT MICROBIOLOGY

Discrimination of post-harvest coffee processing methods by microbial ecology analyses

(2016) Yasmine Hamdouche et al.   FOOD CONTROL

Mass spectrometry screening of Arabica coffee roasting: A non-target and non-volatile approach by EASI-MS and ESI-MS

(2016) Jeane Santos da Rosa et al.   FOOD RESEARCH INTERNATIONAL

Impact of crema on expected and actual espresso coffee experience

(2016) D. Labbe et al.   FOOD RESEARCH INTERNATIONAL

Influence of genotype and environment on coffee quality

(2016) Bing Cheng et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Alanine aminotransferase controls seed dormancy in barley

(2016) Kazuhiro Sato et al.   Nature Communications

What's Inside That Seed We Brew? A New Approach To Mining the Coffee Microbiome

(2015) Michael Joe Vaughan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Microbial ecology and starter culture technology in coffee processing

(2015) Gilberto Vinícius de Melo Pereira et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Overview on the mechanisms of coffee germination and fermentation and their significance for coffee and coffee beverage quality

(2015) Deborah M. Waters et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Coffee fermentation and flavor – An intricate and delicate relationship

(2015) Liang Wei Lee et al.   FOOD CHEMISTRY

Microbiological diversity associated with the spontaneous wet method of coffee fermentation

(2015) Suzana Reis Evangelista et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

A tonoplast Glu/Asp/GABA exchanger that affects tomato fruit amino acid composition

(2015) Christopher J. Snowden et al.   PLANT JOURNAL

Lactic metabolism revisited: metabolism of lactic acid bacteria in food fermentations and food spoilage

(2015) Michael G Gänzle   Current Opinion in Food Science

Microbial Species Diversity, Community Dynamics, and Metabolite Kinetics of Water Kefir Fermentation

(2014) David Laureys et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Utilization of coffee by-products obtained from semi-washed process for production of value-added compounds

(2014) Verónica Alejandra Bonilla-Hermosa et al.   BIORESOURCE TECHNOLOGY

Monitoring psychrotrophic lactic acid bacteria contamination in a ready-to-eat vegetable salad production environment

(2014) Vasileios Pothakos et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Amino acids – A life between metabolism and signaling

(2014) Rainer E. Häusler et al.   PLANT SCIENCE

Antioxidant enzyme activity and hydrogen peroxide content during the drying of Arabica coffee beans

(2013) Mery Y. Rendón et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

Hanseniaspora opuntiae, Saccharomyces cerevisiae, Lactobacillus fermentum, and Acetobacter pasteurianus predominate during well-performed Malaysian cocoa bean box fermentations, underlining the importance of these microbial species for a successful cocoa bean fermentation process

(2013) Zoi Papalexandratou et al.   FOOD MICROBIOLOGY

Comparison of espresso coffee brewing techniques

(2013) Alessandro Parenti et al.   JOURNAL OF FOOD ENGINEERING

Sustainable management of coffee industry by-products and value addition—A review

(2012) Pushpa S. Murthy et al.   RESOURCES CONSERVATION AND RECYCLING

Ecotypic Variability in the Metabolic Response of Seeds to Diurnal Hydration–Dehydration Cycles and its Relationship to Seed Vigor

(2011) Bing Bai et al.   PLANT AND CELL PHYSIOLOGY

Stress Metabolism in Green Coffee Beans (Coffea arabica L.): Expression of Dehydrins and Accumulation of GABA during Drying

(2010) D. Kramer et al.   PLANT AND CELL PHYSIOLOGY

Plant drought stress: effects, mechanisms and management

(2008) M. Farooq et al.   Agronomy for Sustainable Development

Succession of bacterial and fungal communities during natural coffee (Coffea arabica) fermentation

(2008) C SILVA et al.   FOOD MICROBIOLOGY

Concerted modulation of alanine and glutamate metabolism in young Medicago truncatula seedlings under hypoxic stress

(2008) Anis M. Limami et al.   JOURNAL OF EXPERIMENTAL BOTANY

Highway or byway: the metabolic role of the GABA shunt in plants

(2007) Aaron Fait et al.   TRENDS IN PLANT SCIENCE