Comparative genomic analysis and molecular examination of the diversity of enterotoxigenic Escherichia coli isolates from Chile

Genome wide characterization of enterotoxigenic Escherichia coli serogroup O6 isolates from multiple outbreaks and sporadic infections from 1975-2016

(2019) Vaishnavi Pattabiraman et al.   PLoS One

Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS)

(2019) Roberto M. Vidal et al.   PLoS Neglected Tropical Diseases

Genome and Functional Characterization of Colonization Factor Antigen I- and CS6-Encoding Heat-Stable Enterotoxin-Only Enterotoxigenic Escherichia coli Reveals Lineage and Geographic Variation

(2019) Tracy H. Hazen et al.   mSystems

Enterotoxigenic Escherichia coli–blood group A interactions intensify diarrheal severity

(2018) Pardeep Kumar et al.   JOURNAL OF CLINICAL INVESTIGATION

Human Experimental Challenge With Enterotoxigenic Escherichia coli Elicits Immune Responses to Canonical and Novel Antigens Relevant to Vaccine Development

(2018) Subhra Chakraborty et al.   JOURNAL OF INFECTIOUS DISEASES

Characterization of enterotoxigenic Escherichia coli strains isolated from the massive multi-pathogen gastroenteritis outbreak in the Antofagasta region following the Chilean earthquake, 2010

(2017) David Montero et al.   INFECTION GENETICS AND EVOLUTION

Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic E. coli

(2017) Tracy H. Hazen et al.   Scientific Reports

Insights into enterotoxigenic Escherichia coli diversity in Bangladesh utilizing genomic epidemiology

(2017) Jason W. Sahl et al.   Scientific Reports

Identification and characterization of the novel colonization factor CS30 based on whole genome sequencing in enterotoxigenic Escherichia coli (ETEC)

(2017) Astrid von Mentzer et al.   Scientific Reports

Immunogenicity and Protective Efficacy against Enterotoxigenic Escherichia coli Colonization following Intradermal, Sublingual, or Oral Vaccination with EtpA Adhesin

(2016) Qingwei Luo et al.   Clinical and Vaccine Immunology

Identification of new heat-stable (STa) enterotoxin allele variants produced by human enterotoxigenic Escherichia coli (ETEC)

(2016) Enrique Joffré et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic diversity of EPEC associated with clinical presentations of differing severity

(2016) Tracy H. Hazen et al.   Nature Microbiology

Stability of the Encoding Plasmids and Surface Expression of CS6 Differs in Enterotoxigenic Escherichia coli (ETEC) Encoding Different Heat-Stable (ST) Enterotoxins (STh and STp)

(2016) Joshua Tobias et al.   PLoS One

Comparative Genomics Provides Insight into the Diversity of the Attaching and Effacing Escherichia coli Virulence Plasmids

(2015) Tracy H. Hazen et al.   INFECTION AND IMMUNITY

Defining the Phylogenomics of Shigella Species: a Pathway to Diagnostics

(2015) Jason W. Sahl et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Characterization of unstable pEntYN10 from enterotoxigenicEscherichia coli(ETEC) O169:H41

(2015) Erika Ban et al.   Virulence

Conservation and Immunogenicity of Novel Antigens in Diverse Isolates of Enterotoxigenic Escherichia coli

(2015) Qingwei Luo et al.   PLoS Neglected Tropical Diseases

Implications of enterotoxigenicEscherichia coligenomics for vaccine development

(2014) Åsa Sjöling et al.   Expert Review of Vaccines

Novel antigens for enterotoxigenicEscherichia colivaccines

(2014) James Fleckenstein et al.   Expert Review of Vaccines

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution

(2014) Astrid von Mentzer et al.   NATURE GENETICS

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

(2014) Jason W. Sahl et al.   PeerJ

EatA, an Immunogenic Protective Antigen of Enterotoxigenic Escherichia coli, Degrades Intestinal Mucin

(2013) Pardeep Kumar et al.   INFECTION AND IMMUNITY

Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study

(2013) Karen L Kotloff et al.   LANCET

Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli

(2013) T. H. Hazen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Progress and hurdles in the development of vaccines against enterotoxigenicEscherichia coliin humans

(2012) Weiping Zhang et al.   Expert Review of Vaccines

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Type II Heat-Labile Enterotoxins from 50 Diverse Escherichia coli Isolates Belong Almost Exclusively to the LT-IIc Family and May Be Prophage Encoded

(2012) Michael G. Jobling et al.   PLoS One

Brote de gastroenteritis aguda en la Región de Antofagasta,Chile: 2010

(2012) Janepsy Díaz T et al.   Revista Chilena de Infectologia

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Outer Membrane Vesicles Induce Immune Responses to Virulence Proteins and Protect against Colonization by Enterotoxigenic Escherichia coli

(2011) Koushik Roy et al.   Clinical and Vaccine Immunology

Discovery and Phylogenetic Analysis of Novel Members of Class b Enterotoxigenic Escherichia coli Adhesive Fimbriae

(2011) R. A. Nada et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Distribution of Classical and Nonclassical Virulence Genes in Enterotoxigenic Escherichia coli Isolates from Chilean Children and tRNA Gene Screening for Putative Insertion Sites for Genomic Islands

(2011) Felipe Del Canto et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A systematic review of experimental infections with enterotoxigenic Escherichia coli (ETEC)

(2011) Chad K. Porter et al.   VACCINE

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation

(2011) Kevin Galens et al.   Standards in Genomic Sciences

Ergatis: a web interface and scalable software system for bioinformatics workflows

(2010) J. Orvis et al.   BIOINFORMATICS

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

A Comparative Genomic Analysis of Diverse Clonal Types of EnterotoxigenicEscherichia coliReveals Pathovar-Specific Conservation

(2010) Jason W. Sahl et al.   INFECTION AND IMMUNITY

A Commensal Gone Bad: Complete Genome Sequence of the Prototypical Enterotoxigenic Escherichia coli Strain H10407

(2010) L. C. Crossman et al.   JOURNAL OF BACTERIOLOGY

The population genetics of commensal Escherichia coli

(2010) Olivier Tenaillon et al.   NATURE REVIEWS MICROBIOLOGY

Characterization of the most prevalent colonization factor antigens present in Chilean clinical enterotoxigenic Escherichia coli strains using a new multiplex polymerase chain reaction

(2009) Roberto M. Vidal et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths

(2009) Marie Touchon et al.   PLoS Genetics

Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains

(2008) Françoise Jaureguy et al.   BMC GENOMICS

The EtpA Exoprotein of Enterotoxigenic Escherichia coli Promotes Intestinal Colonization and Is a Protective Antigen in an Experimental Model of Murine Infection

(2008) K. Roy et al.   INFECTION AND IMMUNITY

The Pangenome Structure of Escherichia coli: Comparative Genomic Analysis of E. coli Commensal and Pathogenic Isolates

(2008) D. A. Rasko et al.   JOURNAL OF BACTERIOLOGY

Enterotoxigenic Escherichia coli EtpA mediates adhesion between flagella and host cells

(2008) Koushik Roy et al.   NATURE