New and Preliminary Evidence on Altered Oral and Gut Microbiota in Individuals with Autism Spectrum Disorder (ASD): Implications for ASD Diagnosis and Subtyping Based on Microbial Biomarkers

Autism Spectrum Disorder (ASD) with and without Mental Regression is Associated with Changes in the Fecal Microbiota

(2019) Julio Plaza-Díaz et al.   Nutrients

Harnessing Gut Microbes for Mental Health: Getting From Here to There

(2018) Annadora J. Bruce-Keller et al.   BIOLOGICAL PSYCHIATRY

Fecal Clostridiales distribution and short-chain fatty acids reflect bowel habits in irritable bowel syndrome

(2018) Giorgio Gargari et al.   ENVIRONMENTAL MICROBIOLOGY

Alterations of oral microbiota distinguish children with autism spectrum disorders from healthy controls

(2018) Yanan Qiao et al.   Scientific Reports

Dysbiosis and Ecotypes of the Salivary Microbiome Associated With Inflammatory Bowel Diseases and the Assistance in Diagnosis of Diseases Using Oral Bacterial Profiles

(2018) Zhe Xun et al.   Frontiers in Microbiology

Oral microbiome activity in children with autism spectrum disorder

(2018) Steven D. Hicks et al.   Autism Research

The Microbiome and Disease: Reviewing the Links between the Oral Microbiome, Aging, and Alzheimer's Disease

(2018) Deborah K. Shoemark et al.   JOURNAL OF ALZHEIMERS DISEASE

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

Compositional and Temporal Changes in the Gut Microbiome of Pediatric Ulcerative Colitis Patients Are Linked to Disease Course

(2018) Melanie Schirmer et al.   Cell Host & Microbe

Medical comorbidities in children and adolescents with autism spectrum disorders and attention deficit hyperactivity disorders: a systematic review

(2017) Jet B. Muskens et al.   EUROPEAN CHILD & ADOLESCENT PSYCHIATRY

Roseburia spp.: a marker of health?

(2017) Zohreh Tamanai-Shacoori et al.   Future Microbiology

Feeding Problems and Nutrient Intake in Children with and without Autism: A Comparative Study

(2017) Prahbhjot Malhi et al.   INDIAN JOURNAL OF PEDIATRICS

Inflammatory bowel disease and oral health: systematic review and a meta-analysis

(2017) Spyridon N. Papageorgiou et al.   JOURNAL OF CLINICAL PERIODONTOLOGY

Environmental factors influencing the risk of autism

(2017) Mojgan Karahmadi et al.   Journal of Research in Medical Sciences

Proteobacteria: A Common Factor in Human Diseases

(2017) G. Rizzatti et al.   Biomed Research International

Human Gut Symbiont Roseburia hominis Promotes and Regulates Innate Immunity

(2017) Angela M. Patterson et al.   Frontiers in Immunology

New evidences on the altered gut microbiota in autism spectrum disorders

(2017) Francesco Strati et al.   Microbiome

Proteobacteria explain significant functional variability in the human gut microbiome

(2017) Patrick H. Bradley et al.   Microbiome

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

(2017) Amnon Amir et al.   mSystems

Unveiling the gut microbiota composition and functionality associated with constipation through metagenomic analyses

(2017) Leonardo Mancabelli et al.   Scientific Reports

Microbial Reconstitution Reverses Maternal Diet-Induced Social and Synaptic Deficits in Offspring

(2016) Shelly A. Buffington et al.   CELL

Alterations of the human gut microbiome in multiple sclerosis

(2016) Sushrut Jangi et al.   Nature Communications

Comparative In silico Analysis of Butyrate Production Pathways in Gut Commensals and Pathogens

(2016) Swadha Anand et al.   Frontiers in Microbiology

CCLasso: correlation inference for compositional data through Lasso

(2015) Huaying Fang et al.   BIOINFORMATICS

Gut-Microbiota-Brain Axis and Its Effect on Neuropsychiatric Disorders With Suspected Immune Dysregulation

(2015) Anastasia I. Petra et al.   CLINICAL THERAPEUTICS

The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment

(2015) Xuan Zhang et al.   NATURE MEDICINE

Gastrointestinal microbiota in children with autism in Slovakia

(2015) Aleksandra Tomova et al.   PHYSIOLOGY & BEHAVIOR

Influence of Proton-Pump Inhibitors on the Luminal Microbiota in the Gastrointestinal Tract

(2015) Ayumi Tsuda et al.   Clinical and Translational Gastroenterology

Comparison of Fecal Microbiota in Children with Autism Spectrum Disorders and Neurotypical Siblings in the Simons Simplex Collection

(2015) Joshua S. Son et al.   PLoS One

Gastrointestinal Dysfunction in Children With Autism Spectrum Disorders

(2014) Victor Kang et al.   Autism Research

Defining dysbiosis and its influence on host immunity and disease

(2014) Charisse Petersen et al.   CELLULAR MICROBIOLOGY

Altered intestinal microbiota and blood T cell phenotype are shared by patients with Crohn's disease and their unaffected siblings

(2014) Charlotte R Hedin et al.   GUT

Looking in thePorphyromonas gingivaliscabinet of curiosities: the microbium, the host and cancer association

(2014) K.R. Atanasova et al.   Molecular Oral Microbiology

Autism and nutrition: the role of the gut–brain axis

(2014) Marijke M. H. van De Sande et al.   NUTRITION RESEARCH REVIEWS

Evidence linking oxidative stress, mitochondrial dysfunction, and inflammation in the brain of individuals with autism

(2014) Daniel A. Rossignol et al.   Frontiers in Physiology

Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

(2013) Elaine Y. Hsiao et al.   CELL

The dynamics of gut-associated microbial communities during inflammation

(2013) Sebastian E Winter et al.   EMBO REPORTS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Reduced Incidence of Prevotella and Other Fermenters in Intestinal Microflora of Autistic Children

(2013) Dae-Wook Kang et al.   PLoS One

Fecal Microbiota and Metabolome of Children with Autism and Pervasive Developmental Disorder Not Otherwise Specified

(2013) Maria De Angelis et al.   PLoS One

Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ

(2013) Caitriona M. Guinane et al.   Therapeutic Advances in Gastroenterology

EMPeror: a tool for visualizing high-throughput microbial community data

(2013) Yoshiki Vázquez-Baeza et al.   GigaScience

Associating microbiome composition with environmental covariates using generalized UniFrac distances

(2012) Jun Chen et al.   BIOINFORMATICS

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour

(2012) John F. Cryan et al.   NATURE REVIEWS NEUROSCIENCE

Gut microbiota, immune development and function

(2012) Stig Bengmark   PHARMACOLOGICAL RESEARCH

Inferring Correlation Networks from Genomic Survey Data

(2012) Jonathan Friedman et al.   PLoS Computational Biology

Variance adjusted weighted UniFrac: a powerful beta diversity measure for comparing communities based on phylogeny

(2011) Qin Chang et al.   BMC BIOINFORMATICS

Gastrointestinal flora and gastrointestinal status in children with autism – comparisons to typical children and correlation with autism severity

(2011) James B Adams et al.   BMC GASTROENTEROLOGY

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Impaired Carbohydrate Digestion and Transport and Mucosal Dysbiosis in the Intestines of Children with Autism and Gastrointestinal Disturbances

(2011) Brent L. Williams et al.   PLoS One

Pyrosequencing study of fecal microflora of autistic and control children

(2010) Sydney M. Finegold et al.   ANAEROBE

Binding and degradation of fibrinogen by Bacteroides fragilis and characterization of a 54 kDa fibrinogen-binding protein

(2010) S. Houston et al.   MICROBIOLOGY-SGM

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Simple diagnostic approach to childhood fecal retention using the Leech score and Bristol stool form scale in medical practice

(2009) Hong Koh et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE