Unveiling the gut microbiota composition and functionality associated with constipation through metagenomic analyses

Potential role of fecal microbiota from patients with slow transit constipation in the regulation of gastrointestinal motility

(2017) Xiaolong Ge et al.   Scientific Reports

Gut microbiome predictors of treatment response and recurrence in primaryClostridium difficileinfection

(2016) S. Khanna et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Molecular characterization of the intestinal microbiota in patients with and without abdominal bloating

(2016) Tamar Ringel-Kulka et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Relationship Between Microbiota of the Colonic Mucosa vs Feces and Symptoms, Colonic Transit, and Methane Production in Female Patients With Chronic Constipation

(2016) Gopanandan Parthasarathy et al.   GASTROENTEROLOGY

Identification of key taxa that favor intestinal colonization of Clostridium difficile in an adult Chinese population

(2016) Silan Gu et al.   MICROBES AND INFECTION

Intestinal microbiota and chronic constipation

(2016) Ying Zhao et al.   SpringerPlus

Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut

(2016) Henrik M. Roager et al.   Nature Microbiology

Gut microbiota composition and Clostridium difficile infection in hospitalized elderly individuals: a metagenomic study

(2016) Christian Milani et al.   Scientific Reports

Insight into alteration of gut microbiota in Clostridium difficile infection and asymptomatic C. difficile colonization

(2015) Lihua Zhang et al.   ANAEROBE

Gut microbes promote colonic serotonin production through an effect of short-chain fatty acids on enterochromaffin cells

(2015) Christopher S. Reigstad et al.   FASEB JOURNAL

Structural robustness of the gut mucosal microbiota is associated with Crohn's disease remission after surgery

(2015) S Mondot et al.   GUT

Clostridium difficile heterogeneously impacts intestinal community architecture but drives stable metabolome responses

(2015) David Rojo et al.   ISME Journal

Reduction of butyrate- and methane-producing microorganisms in patients with Irritable Bowel Syndrome

(2015) Marta Pozuelo et al.   Scientific Reports

Change of Fecal Flora and Effectiveness of the Short-term VSL#3 Probiotic Treatment in Patients With Functional Constipation

(2015) Seong-Eun Kim et al.   Journal of Neurogastroenterology and Motility

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Modulation of Fecal Clostridiales Bacteria and Butyrate by Probiotic Intervention with Lactobacillus paracasei DG Varies among Healthy Adults

(2014) Chiara Ferrario et al.   JOURNAL OF NUTRITION

Structural changes in the gut microbiome of constipated patients

(2014) Lixin Zhu et al.   PHYSIOLOGICAL GENOMICS

Methylglyoxal Induces Systemic Symptoms of Irritable Bowel Syndrome

(2014) Shuang Zhang et al.   PLoS One

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

(2013) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Assessing the Fecal Microbiota: An Optimized Ion Torrent 16S rRNA Gene-Based Analysis Protocol

(2013) Christian Milani et al.   PLoS One

Stool Microbiome and Metabolome Differences between Colorectal Cancer Patients and Healthy Adults

(2013) Tiffany L. Weir et al.   PLoS One

A Modular Organization of the Human Intestinal Mucosal Microbiota and Its Association with Inflammatory Bowel Disease

(2013) Maomeng Tong et al.   PLoS One

Defining the Vulnerable Period for Re-Establishment of Clostridium difficile Colonization after Treatment of C. difficile Infection with Oral Vancomycin or Metronidazole

(2013) Turki Abujamel et al.   PLoS One

Functional dysbiosis within the gut microbiota of patients with constipated-irritable bowel syndrome

(2012) C. Chassard et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Global Prevalence of and Risk Factors for Irritable Bowel Syndrome: A Meta-analysis

(2012) Rebecca M. Lovell et al.   Clinical Gastroenterology and Hepatology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Medical Management of Constipation

(2012) Meredith Portalatin et al.   Clinics in Colon and Rectal Surgery

Prevalence of and Risk Factors for, Chronic Idiopathic Constipation in the Community: Systematic Review and Meta-analysis

(2011) Nicole C Suares et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Gastrointestinal Microbiome Signatures of Pediatric Patients With Irritable Bowel Syndrome

(2011) Delphine M. Saulnier et al.   GASTROENTEROLOGY

Systematic review: impact of constipation on quality of life in adults and children

(2010) J. BELSEY et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Short-Chain Fatty Acids Regulate the Enteric Neurons and Control Gastrointestinal Motility in Rats

(2010) Rodolphe Soret et al.   GASTROENTEROLOGY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Methanogenic Flora Is Associated With Altered Colonic Transit but Not Stool Characteristics in Constipation Without IBS

(2009) Ashok Attaluri et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Bifidobacteria: from ecology to genomics

(2009) Francesca Turroni   Frontiers in Bioscience-Landmark