Cooperation of cancer drivers with regulatory germline variants shapes clinical outcomes
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Title
Cooperation of cancer drivers with regulatory germline variants shapes clinical outcomes
Authors
Keywords
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Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-09-11
DOI
10.1038/s41467-019-12071-2
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- (2018) Susanne N. Gröbner et al. NATURE
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- (2018) Michaela C. Baldauf et al. OncoImmunology
- Ewing sarcoma
- (2018) Thomas G. P. Grünewald et al. Nature Reviews Disease Primers
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- (2018) Gaylor Boulay et al. GENES & DEVELOPMENT
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- (2018) Nathaniel D. Anderson et al. SCIENCE
- Genome-wide association study identifies multiple new loci associated with Ewing sarcoma susceptibility
- (2018) Mitchell J. Machiela et al. Nature Communications
- Genome-wide profiling of heritable and de novo STR variations
- (2017) Thomas Willems et al. NATURE METHODS
- Identification of two types of GGAA-microsatellites and their roles in EWS/FLI binding and gene regulation in Ewing sarcoma
- (2017) Kirsten M. Johnson et al. PLoS One
- MYBL2 (B-Myb): a central regulator of cell proliferation, cell survival and differentiation involved in tumorigenesis
- (2017) Julian Musa et al. Cell Death & Disease
- Robust diagnosis of Ewing sarcoma by immunohistochemical detection of super-enhancer-driven EWSR1-ETS targets
- (2017) Michaela C. Baldauf et al. Oncotarget
- Preclinical Justification of pbi-shRNA EWS/FLI1 Lipoplex (LPX) Treatment for Ewing's Sarcoma
- (2016) Donald D. Rao et al. MOLECULAR THERAPY
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- (2016) Martin Fischer et al. NUCLEIC ACIDS RESEARCH
- Homozygous G/G variant of SNP309 in the human MDM2 gene is associated with earlier tumor onset in Caucasian female renal cell carcinoma patients
- (2016) C G Stoehr et al. Oncogenesis
- Removing batch effects from purified plasma cell gene expression microarrays with modified ComBat
- (2015) Caleb K Stein et al. BMC BIOINFORMATICS
- Genetic Variation Determines PPARγ Function and Anti-diabetic Drug Response In Vivo
- (2015) Raymond E. Soccio et al. CELL
- Natural Variation in Gene Expression Modulates the Severity of Mutant Phenotypes
- (2015) Victoria Vu et al. CELL
- Identification of Genetic Factors that Modify Clinical Onset of Huntington’s Disease
- (2015) Jong-Min Lee et al. CELL
- Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite
- (2015) Thomas G P Grünewald et al. NATURE GENETICS
- Highly specific epigenome editing by CRISPR-Cas9 repressors for silencing of distal regulatory elements
- (2015) Pratiksha I Thakore et al. NATURE METHODS
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- EWS-FLI1 Utilizes Divergent Chromatin Remodeling Mechanisms to Directly Activate or Repress Enhancer Elements in Ewing Sarcoma
- (2014) Nicolò Riggi et al. CANCER CELL
- Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
- (2014) Luke A. Gilbert et al. CELL
- MDM2 promotor polymorphism and disease characteristics in chronic lymphocytic leukemia: results of an individual patient data-based meta-analysis
- (2014) A. Benner et al. HAEMATOLOGICA
- The Genomic Landscape of Pediatric Ewing Sarcoma
- (2014) B. D. Crompton et al. Cancer Discovery
- Genomic Landscape of Ewing Sarcoma Defines an Aggressive Subtype with Co-Association of STAG2 and TP53 Mutations
- (2014) F. Tirode et al. Cancer Discovery
- The Genomic Landscape of the Ewing Sarcoma Family of Tumors Reveals Recurrent STAG2 Mutation
- (2014) Andrew S. Brohl et al. PLoS Genetics
- PAVIS: a tool for Peak Annotation and Visualization
- (2013) Weichun Huang et al. BIOINFORMATICS
- A Polymorphic p53 Response Element in KIT Ligand Influences Cancer Risk and Has Undergone Natural Selection
- (2013) Jorge Zeron-Medina et al. CELL
- Oncogenic ETS fusions deregulate E2F3 target genes in Ewing sarcoma and prostate cancer
- (2013) Sven Bilke et al. GENOME RESEARCH
- Precision Oncology: An Overview
- (2013) Levi A. Garraway et al. JOURNAL OF CLINICAL ONCOLOGY
- Inferring tumour purity and stromal and immune cell admixture from expression data
- (2013) Kosuke Yoshihara et al. Nature Communications
- The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression
- (2012) S. Sadasivam et al. GENES & DEVELOPMENT
- Common variants near TARDBP and EGR2 are associated with susceptibility to Ewing sarcoma
- (2012) Sophie Postel-Vinay et al. NATURE GENETICS
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- NIH Image to ImageJ: 25 years of image analysis
- (2012) Caroline A Schneider et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Single-vector inducible lentiviral RNAi system for oncology target validation
- (2011) Dmitri Wiederschain et al. CELL CYCLE
- Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription
- (2011) M. Patel et al. GENOME RESEARCH
- A High-Frequency Regulatory Polymorphism in the p53 Pathway Accelerates Tumor Development
- (2010) Sean M. Post et al. CANCER CELL
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Overcoming Resistance to Conventional Drugs in Ewing Sarcoma and Identification of Molecular Predictors of Outcome
- (2009) Katia Scotlandi et al. JOURNAL OF CLINICAL ONCOLOGY
- The Oncogenic EWS-FLI1 Protein Binds In Vivo GGAA Microsatellite Sequences with Potential Transcriptional Activation Function
- (2009) Noëlle Guillon et al. PLoS One
- An embryonic stem cell–like gene expression signature in poorly differentiated aggressive human tumors
- (2008) Ittai Ben-Porath et al. NATURE GENETICS
- Microsatellites as EWS/FLI response elements in Ewing's sarcoma
- (2008) K. Gangwal et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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