Bacterial predator-prey coevolution accelerates genome evolution and selects on virulence-associated prey defences

Is “Wolf‐Pack” Predation by Antimicrobial Bacteria Cooperative? Cell Behaviour and Predatory Mechanisms Indicate Profound Selfishness, Even when Working Alongside Kin

(2019) Rupert C. Marshall et al.   BIOESSAYS

Evolution of high-level resistance during low-level antibiotic exposure

(2018) Erik Wistrand-Yuen et al.   Nature Communications

Dual Role of Mechanisms Involved in Resistance to Predation by Protozoa and Virulence to Humans

(2018) Shuyang Sun et al.   Frontiers in Microbiology

Molecular and Evolutionary Determinants of Bacteriophage Host Range

(2018) Patrick A. de Jonge et al.   TRENDS IN MICROBIOLOGY

Dynamical trade-offs arise from antagonistic coevolution and decrease intraspecific diversity

(2017) Weini Huang et al.   Nature Communications

Injections of Predatory Bacteria Work Alongside Host Immune Cells to Treat Shigella Infection in Zebrafish Larvae

(2016) Alexandra R. Willis et al.   CURRENT BIOLOGY

Bacterial predation: 75 years and counting!

(2016) Juana Pérez et al.   ENVIRONMENTAL MICROBIOLOGY

Protist predation can select for bacteria with lowered susceptibility to infection by lytic phages

(2015) Anni-Maria Örmälä-Odegrip et al.   BMC EVOLUTIONARY BIOLOGY

Sea otters, kelp forests, and the extinction of Steller’s sea cow

(2015) James A. Estes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Battling Phages: How Bacteria Defend against Viral Attack

(2015) Kimberley D. Seed   PLoS Pathogens

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq

(2014) Jeffrey E Barrick et al.   BMC GENOMICS

Running with the Red Queen: the role of biotic conflicts in evolution

(2014) M. A. Brockhurst et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The lethal cargo of Myxococcus xanthus outer membrane vesicles

(2014) James E. Berleman et al.   Frontiers in Microbiology

Predatory Bacteria: A Potential Ally against Multidrug-Resistant Gram-Negative Pathogens

(2013) Daniel E. Kadouri et al.   PLoS One

Experimental coevolution of species interactions

(2013) Michael A. Brockhurst et al.   TRENDS IN ECOLOGY & EVOLUTION

The Genetic Basis of Escherichia coli Pathoadaptation to Macrophages

(2013) Migla Miskinyte et al.   PLoS Pathogens

The major facilitator superfamily (MFS) revisited

(2012) Vamsee S. Reddy et al.   FEBS Journal

Decomposing Predation: Testing for Parameters that Correlate with Predatory Performance by a Social Bacterium

(2012) Helena Mendes-Soares et al.   MICROBIAL ECOLOGY

FREQ-Seq: A Rapid, Cost-Effective, Sequencing-Based Method to Determine Allele Frequencies Directly from Mixed Populations

(2012) Lon M. Chubiz et al.   PLoS One

APCluster: an R package for affinity propagation clustering

(2011) U. Bodenhofer et al.   BIOINFORMATICS

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Host-parasite coevolutionary arms races give way to fluctuating selection

(2011) Alex R. Hall et al.   ECOLOGY LETTERS

Co-evolution with lytic phage selects for the mucoid phenotype of Pseudomonas fluorescens SBW25

(2011) Pauline Deirdre Scanlan et al.   ISME Journal

Comparative Analysis of Myxococcus Predation on Soil Bacteria

(2010) A. D. Morgan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The bactericidal action on Escherichia coli of ZF-RNase-3 is triggered by the suicidal action of the bacterium OmpT protease

(2010) Anna Zanfardino et al.   FEBS Journal

Escherichia coli outer membrane protease OmpT confers resistance to urinary cationic peptides

(2010) Chang-Ye Hui et al.   MICROBIOLOGY AND IMMUNOLOGY

Antagonistic coevolution accelerates molecular evolution

(2010) Steve Paterson et al.   NATURE

Sociobiology of the Myxobacteria

(2009) Gregory J. Velicer et al.   Annual Review of Microbiology

Recombineering: a homologous recombination-based method of genetic engineering

(2009) Shyam K Sharan et al.   Nature Protocols

Animal camouflage: current issues and new perspectives

(2008) M. Stevens et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Marine Biofilm Bacteria Evade Eukaryotic Predation by Targeted Chemical Defense

(2008) Carsten Matz et al.   PLoS One

Experimental evolution of a microbial predator's ability to find prey

(2008) K. L Hillesland et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES