Shotgun metagenomics reveals both taxonomic and tryptophan pathway differences of gut microbiota in major depressive disorder patients

Alterations in Gut Glutamate Metabolism Associated with Changes in Gut Microbiota Composition in Children with Autism Spectrum Disorder

(2019) Mingbang Wang et al.   mSystems

The neuroactive potential of the human gut microbiota in quality of life and depression

(2019) Mireia Valles-Colomer et al.   Nature Microbiology

Man and the Microbiome: A New Theory of Everything?

(2019) Mary I. Butler et al.   Annual Review of Clinical Psychology

Systematic Review of Gut Microbiota and Major Depression

(2019) Stephanie G. Cheung et al.   Frontiers in Psychiatry

Similarly in depression, nuances of gut microbiota: Evidences from a shotgun metagenomics sequencing study on major depressive disorder versus bipolar disorder with current major depressive episode patients

(2019) Han Rong et al.   JOURNAL OF PSYCHIATRIC RESEARCH

Microbiota-Derived Indole Metabolites Promote Human and Murine Intestinal Homeostasis through Regulation of Interleukin-10 Receptor

(2018) Erica E. Alexeev et al.   AMERICAN JOURNAL OF PATHOLOGY

Harnessing Gut Microbes for Mental Health: Getting From Here to There

(2018) Annadora J. Bruce-Keller et al.   BIOLOGICAL PSYCHIATRY

Finding the needle in the haystack: systematic identification of psychobiotics

(2018) Aisling Bambury et al.   BRITISH JOURNAL OF PHARMACOLOGY

Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease

(2018) Allison Agus et al.   Cell Host & Microbe

Effect of probiotic and prebiotic vs placebo on psychological outcomes in patients with major depressive disorder: A randomized clinical trial

(2018) Asma Kazemi et al.   CLINICAL NUTRITION

Gut microbiota, metabolism and psychopathology: A critical review and novel perspectives

(2018) Robin N. Groen et al.   CRITICAL REVIEWS IN CLINICAL LABORATORY SCIENCES

Human gut microbiome: hopes, threats and promises

(2018) Patrice D Cani   GUT

Plasma amino acid profile in major depressive disorder: Analyses in two independent case-control sample sets

(2018) Shintaro Ogawa et al.   JOURNAL OF PSYCHIATRIC RESEARCH

Aryl hydrocarbon receptor and intestinal immunity

(2018) Bruno Lamas et al.   Mucosal Immunology

Microglial control of astrocytes in response to microbial metabolites

(2018) Veit Rothhammer et al.   NATURE

Comparative metaproteomics analysis shows altered fecal microbiota signatures in patients with major depressive disorder

(2018) Zhi Chen et al.   NEUROREPORT

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

(2018) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Altered tryptophan catabolite concentrations in major depressive disorder and associated changes in hippocampal subfield volumes

(2018) Kelly Doolin et al.   PSYCHONEUROENDOCRINOLOGY

Gut microbiome and depression: what we know and what we need to know

(2018) Gal Winter et al.   REVIEWS IN THE NEUROSCIENCES

Complete genome sequence of Enterococcus durans KLDS6.0933, a potential probiotic strain with high cholesterol removal ability

(2018) Bailiang Li et al.   Gut Pathogens

Serotonin is an endogenous regulator of intestinal CYP1A1 via AhR

(2018) Christopher Manzella et al.   Scientific Reports

Microbiota-gut-brain research: a critical analysis

(2018) Katarzyna B. Hooks et al.   BEHAVIORAL AND BRAIN SCIENCES

Impaired Aryl Hydrocarbon Receptor Ligand Production by the Gut Microbiota Is a Key Factor in Metabolic Syndrome

(2018) Jane M. Natividad et al.   Cell Metabolism

The Environmental Sensor AHR Protects from Inflammatory Damage by Maintaining Intestinal Stem Cell Homeostasis and Barrier Integrity

(2018) Amina Metidji et al.   IMMUNITY

Association of serum bilirubin in newborns affected by jaundice with gut microbiota dysbiosis

(2018) Shaoming Zhou et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

You are what you eat: diet, health and the gut microbiota

(2018) Niv Zmora et al.   Nature Reviews Gastroenterology & Hepatology

Changes in metabolism and microbiota after 24-week risperidone treatment in drug naïve, normal weight patients with first episode schizophrenia

(2018) Xiuxia Yuan et al.   SCHIZOPHRENIA RESEARCH

Causality in dietary interventions—building a case for gut microbiota

(2018) Yan Y. Lam et al.   Genome Medicine

The Aryl Hydrocarbon Receptor Pathway Defines the Time Frame for Restorative Neurogenesis

(2018) Rossella Di Giaimo et al.   Cell Reports

A comparative study of the gut microbiota in immune-mediated inflammatory diseases—does a common dysbiosis exist?

(2018) Jessica D. Forbes et al.   Microbiome

Probiotic Lactobacillus Plantarum 299v decreases kynurenine concentration and improves cognitive functions in patients with major depression: A double-blind, randomized, placebo controlled study

(2018) Leszek Rudzki et al.   PSYCHONEUROENDOCRINOLOGY

Increased human intestinal barrier permeability plasma biomarkers zonulin and FABP2 correlated with plasma LPS and altered gut microbiome in anxiety or depression

(2017) Bruce R Stevens et al.   GUT

Prevotella and Klebsiella proportions in fecal microbial communities are potential characteristic parameters for patients with major depressive disorder

(2017) Ping Lin et al.   JOURNAL OF AFFECTIVE DISORDERS

Feedback control of AHR signalling regulates intestinal immunity

(2017) Chris Schiering et al.   NATURE

Brain–gut–microbiota axis — mood, metabolism and behaviour

(2017) Timothy G. Dinan et al.   Nature Reviews Gastroenterology & Hepatology

Serotonin and neuroplasticity – Links between molecular, functional and structural pathophysiology in depression

(2017) Christoph Kraus et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data

(2017) Achal Dhariwal et al.   NUCLEIC ACIDS RESEARCH

The role of probiotics in children with autism spectrum disorder: A prospective, open-label study

(2017) Sanaa Y. Shaaban et al.   NUTRITIONAL NEUROSCIENCE

Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania

(2017) Samuel A. Smits et al.   SCIENCE

Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice

(2017) Giada De Palma et al.   Science Translational Medicine

A combination of quercetin and resveratrol reduces obesity in high-fat diet-fed rats by modulation of gut microbiota

(2017) Le Zhao et al.   Food & Function

Optimizing methods and dodging pitfalls in microbiome research

(2017) Dorothy Kim et al.   Microbiome

May the Force Be With You: The Light and Dark Sides of the Microbiota–Gut–Brain Axis in Neuropsychiatry

(2016) Eoin Sherwin et al.   CNS DRUGS

Inflammation and the microbiome: implications for depressive disorders

(2016) Shawn Hayley et al.   CURRENT OPINION IN PHARMACOLOGY

Possible association of Bifidobacterium and Lactobacillus in the gut microbiota of patients with major depressive disorder

(2016) Emiko Aizawa et al.   JOURNAL OF AFFECTIVE DISORDERS

Transferring the blues: Depression-associated gut microbiota induces neurobehavioural changes in the rat

(2016) John R. Kelly et al.   JOURNAL OF PSYCHIATRIC RESEARCH

The serotonergic system in the neurobiology of depression: Relevance for novel antidepressants

(2016) Stephan Köhler et al.   JOURNAL OF PSYCHOPHARMACOLOGY

The Association between Baseline Subjective Anxiety Rating and Changes in Cardiac Autonomic Nervous Activity in Response to Tryptophan Depletion in Healthy Volunteers

(2016) Chih Yin Hsiao et al.   MEDICINE

From gut dysbiosis to altered brain function and mental illness: mechanisms and pathways

(2016) G B Rogers et al.   MOLECULAR PSYCHIATRY

Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host’s metabolism

(2016) P Zheng et al.   MOLECULAR PSYCHIATRY

Type I interferons and microbial metabolites of tryptophan modulate astrocyte activity and central nervous system inflammation via the aryl hydrocarbon receptor

(2016) Veit Rothhammer et al.   NATURE MEDICINE

Integrating neuroimmune systems in the neurobiology of depression

(2016) Eric S. Wohleb et al.   NATURE REVIEWS NEUROSCIENCE

The Human Intestinal Microbiome in Health and Disease

(2016) Susan V. Lynch et al.   NEW ENGLAND JOURNAL OF MEDICINE

Clinical and metabolic response to probiotic administration in patients with major depressive disorder: A randomized, double-blind, placebo-controlled trial

(2016) Ghodarz Akkasheh et al.   NUTRITION

The role of pro-inflammatory cytokines in neuroinflammation, neurogenesis and the neuroendocrine system in major depression

(2016) Yong-Ku Kim et al.   PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY

Inflammation: Depression Fans the Flames and Feasts on the Heat

(2015) Janice K. Kiecolt-Glaser et al.   AMERICAN JOURNAL OF PSYCHIATRY

Serotonin, tryptophan metabolism and the brain-gut-microbiome axis

(2015) S.M. O’Mahony et al.   BEHAVIOURAL BRAIN RESEARCH

Altered fecal microbiota composition in patients with major depressive disorder

(2015) Haiyin Jiang et al.   BRAIN BEHAVIOR AND IMMUNITY

The gut microbiome and diet in psychiatry

(2015) Sarah Dash et al.   CURRENT OPINION IN PSYCHIATRY

Inflammation and clinical response to treatment in depression: A meta-analysis

(2015) R. Strawbridge et al.   EUROPEAN NEUROPSYCHOPHARMACOLOGY

Revisiting the Serotonin Hypothesis: Implications for Major Depressive Disorders

(2015) Marc Fakhoury   MOLECULAR NEUROBIOLOGY

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling

(2015) Eric A. Franzosa et al.   NATURE REVIEWS MICROBIOLOGY

Gastrointestinal microbiota in children with autism in Slovakia

(2015) Aleksandra Tomova et al.   PHYSIOLOGY & BEHAVIOR

Linear growth faltering in infants is associated with Acidaminococcus sp. and community-level changes in the gut microbiota

(2015) Ethan K. Gough et al.   Microbiome

Feature Selection with theBorutaPackage

(2015) Miron B. Kursa et al.   Journal of Statistical Software

PlasmaL-Tryptophan Concentration in Major Depressive Disorder

(2014) Shintaro Ogawa et al.   JOURNAL OF CLINICAL PSYCHIATRY

Correlation between the human fecal microbiota and depression

(2014) A. Naseribafrouei et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Psychobiotics: A Novel Class of Psychotropic

(2013) Timothy G. Dinan et al.   BIOLOGICAL PSYCHIATRY

Tryptophan Catabolites from Microbiota Engage Aryl Hydrocarbon Receptor and Balance Mucosal Reactivity via Interleukin-22

(2013) Teresa Zelante et al.   IMMUNITY

Differential abundance analysis for microbial marker-gene surveys

(2013) Joseph N Paulson et al.   NATURE METHODS

Serotonin signalling in the gut—functions, dysfunctions and therapeutic targets

(2013) Gary M. Mawe et al.   Nature Reviews Gastroenterology & Hepatology

Stress, serotonin, and hippocampal neurogenesis in relation to depression and antidepressant effects

(2013) Ian Mahar et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

Symptoms of depression and anxiety in anorexia nervosa: Links with plasma tryptophan and serotonin metabolism.

(2013) Claire Gauthier et al.   PSYCHONEUROENDOCRINOLOGY

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Gut–brain axis: how the microbiome influences anxiety and depression

(2013) Jane A. Foster et al.   TRENDS IN NEUROSCIENCES

Isolation and structural identification of glycopolymers of Bifidobacterium bifidum BIM B-733D as putative players in pathogenesis of autoimmune thyroid diseases

(2013) E.P. Kiseleva et al.   Beneficial Microbes

Communication between gastrointestinal bacteria and the nervous system

(2012) Javier A Bravo et al.   CURRENT OPINION IN PHARMACOLOGY

Transfer of Intestinal Microbiota From Lean Donors Increases Insulin Sensitivity in Individuals With Metabolic Syndrome

(2012) Anne Vrieze et al.   GASTROENTEROLOGY

Random forests for genomic data analysis

(2012) Xi Chen et al.   GENOMICS

Deletion or activation of the aryl hydrocarbon receptor alters adult hippocampal neurogenesis and contextual fear memory

(2012) Sarah E. Latchney et al.   JOURNAL OF NEUROCHEMISTRY

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour

(2012) John F. Cryan et al.   NATURE REVIEWS NEUROSCIENCE

Acute Tryptophan Depletion Increases Translational Indices of Anxiety but not Fear: Serotonergic Modulation of the Bed Nucleus of the Stria Terminalis?

(2012) Oliver J Robinson et al.   NEUROPSYCHOPHARMACOLOGY

Increased Gut Permeability and Microbiota Change Associate with Mesenteric Fat Inflammation and Metabolic Dysfunction in Diet-Induced Obese Mice

(2012) Yan Y. Lam et al.   PLoS One

Potential clinical utility of plasma amino acid profiling in the detection of major depressive disorder

(2012) Hong-Bo Xu et al.   PSYCHIATRY RESEARCH

The Serotonin Transporter Promoter Variant (5-HTTLPR), Stress, and Depression Meta-analysis Revisited

(2011) Katja Karg et al.   ARCHIVES OF GENERAL PSYCHIATRY

Prediction of large esophageal varices in cirrhotic patients using classification and regression tree analysis

(2011) Wan-dong Hong et al.   Clinics

Eggerthella lenta bacteremia in a Crohn’s disease patient after ileocecal resection

(2011) Venkata R Thota et al.   Future Microbiology

The Intestinal Microbiota Affect Central Levels of Brain-Derived Neurotropic Factor and Behavior in Mice

(2011) Premysl Bercik et al.   GASTROENTEROLOGY

Antidepressants recruit new neurons to improve stress response regulation

(2011) A Surget et al.   MOLECULAR PSYCHIATRY

Adult hippocampal neurogenesis buffers stress responses and depressive behaviour

(2011) Jason S. Snyder et al.   NATURE

The microbiome-gut-brain axis: from bowel to behavior

(2011) J. F. Cryan et al.   NEUROGASTROENTEROLOGY AND MOTILITY

The level of arabinitol in autistic children after probiotic therapy

(2011) Joanna Kałużna-Czaplińska et al.   NUTRITION

The role of components of Bifidobacterium and Lactobacillus in pathogenesis and serologic diagnosis of autoimmune thyroid diseases

(2011) E. Kiseleva et al.   Beneficial Microbes

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Assessment of psychotropic-like properties of a probiotic formulation ( Lactobacillus helveticus R0052 and Bifidobacterium longum R0175) in rats and human subjects

(2010) Michaël Messaoudi et al.   BRITISH JOURNAL OF NUTRITION

Serotonin transporter gene polymorphisms and treatment-resistant depression

(2010) Cristian Bonvicini et al.   PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY

The Relationship Between Intestinal Microbiota and the Central Nervous System in Normal Gastrointestinal Function and Disease

(2009) Stephen M. Collins et al.   GASTROENTEROLOGY