Ribosome collisions alter frameshifting at translational reprogramming motifs in bacterial mRNAs

The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy

(2019) Ziao Fu et al.   Nature Communications

Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel

(2018) Yan Zhang et al.   STRUCTURE

Translation in Prokaryotes

(2018) Marina V. Rodnina   Cold Spring Harbor Perspectives in Biology

Hypusine, a polyamine-derived amino acid critical for eukaryotic translation

(2018) Myung Hee Park et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ZNF598 Is a Quality Control Sensor of Collided Ribosomes

(2018) Szymon Juszkiewicz et al.   MOLECULAR CELL

Ribosome Collision Is Critical for Quality Control during No-Go Decay

(2017) Carrie L. Simms et al.   MOLECULAR CELL

UCSF ChimeraX: Meeting modern challenges in visualization and analysis

(2017) Thomas D. Goddard et al.   PROTEIN SCIENCE

Structural Basis for Ribosome Rescue in Bacteria

(2017) Paul Huter et al.   TRENDS IN BIOCHEMICAL SCIENCES

Spatial Distribution and Ribosome-Binding Dynamics of EF-P in Live Escherichia coli

(2017) Sonisilpa Mohapatra et al.   mBio

Ribosome rearrangements at the onset of translational bypassing

(2017) Xabier Agirrezabala et al.   Science Advances

Intersubunit Bridges of the Bacterial Ribosome

(2016) Qi Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use

(2016) John F. Atkins et al.   NUCLEIC ACIDS RESEARCH

Translational termination without a stop codon

(2016) Nathan R. James et al.   SCIENCE

New Structural Insights into Translational Miscoding

(2016) Alexey Rozov et al.   TRENDS IN BIOCHEMICAL SCIENCES

A Role for REP Sequences in Regulating Translation

(2015) Wenxing Liang et al.   MOLECULAR CELL

Structure of the E. coli ribosome–EF-Tu complex at

(2015) Niels Fischer et al.   NATURE

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly

(2015) Yury S Polikanov et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly

(2015) Yury S Polikanov et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

High-Precision Analysis of Translational Pausing by Ribosome Profiling in Bacteria Lacking EFP

(2015) Christopher J. Woolstenhulme et al.   Cell Reports

Mechanisms of ribosome stalling by SecM at multiple elongation steps

(2015) Jun Zhang et al.   eLife

The Large Ribosomal Subunit Protein L9 Enables the Growth of EF-P Deficient Cells and Enhances Small Subunit Maturation

(2015) Anusha Naganathan et al.   PLoS One

Dom34 Rescues Ribosomes in 3′ Untranslated Regions

(2014) Nicholas R. Guydosh et al.   CELL

Structured mRNA induces the ribosome into a hyper-rotated state

(2014) Peiwu Qin et al.   EMBO REPORTS

Translation Initiation Rate Determines the Impact of Ribosome Stalling on Bacterial Protein Synthesis

(2014) Steven J. Hersch et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Analysis of tetra- and hepta-nucleotides motifs promoting -1 ribosomal frameshifting in Escherichia coli

(2014) V. Sharma et al.   NUCLEIC ACIDS RESEARCH

A frameshifting stimulatory stem loop destabilizes the hybrid state and impedes ribosomal translocation

(2014) H.-K. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Dynamics of SecM-Induced Translational Stalling

(2014) Albert Tsai et al.   Cell Reports

(R)-β-Lysine-modified Elongation Factor P Functions in Translation Elongation

(2013) Tammy J. Bullwinkle et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dynamics of translation by single ribosomes through mRNA secondary structures

(2013) Chunlai Chen et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Nascent peptides that block protein synthesis in bacteria

(2013) C. J. Woolstenhulme et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Elongation Factor G Bound to the Ribosome in an Intermediate State of Translocation

(2013) D. S. Tourigny et al.   SCIENCE

Ribosome engineering to promote new crystal forms

(2012) Maria Selmer et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Furtherin VitroExploration Fails to Support the Allosteric Three-site Model

(2012) Alexandros D. Petropoulos et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Robust Quantification of Polymerase Chain Reactions Using Global Fitting

(2012) Ana C. Carr et al.   PLoS One

EF-P Is Essential for Rapid Synthesis of Proteins Containing Consecutive Proline Residues

(2012) L. K. Doerfel et al.   SCIENCE

Translation Elongation Factor EF-P Alleviates Ribosome Stalling at Polyproline Stretches

(2012) S. Ude et al.   SCIENCE

Alternative Fates of Paused Ribosomes during Translation Termination

(2011) Jason S. Seidman et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Allosteric vs. spontaneous exit-site (E-site) tRNA dissociation early in protein synthesis

(2011) C. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and Dynamics of a Processive Brownian Motor: The Translating Ribosome

(2010) Joachim Frank et al.   Annual Review of Biochemistry

Short spacing between the Shine-Dalgarno sequence and P codon destabilizes codon-anticodon pairing in the P site to promote +1 programmed frameshifting

(2010) Aishwarya Devaraj et al.   MOLECULAR MICROBIOLOGY

Structural aspects of messenger RNA reading frame maintenance by the ribosome

(2010) Lasse B Jenner et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Native 3D Organization of Bacterial Polysomes

(2009) Florian Brandt et al.   CELL

Automated design of synthetic ribosome binding sites to control protein expression

(2009) Howard M Salis et al.   NATURE BIOTECHNOLOGY

Formation of the First Peptide Bond: The Structure of EF-P Bound to the 70S Ribosome

(2009) G. Blaha et al.   SCIENCE

The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State

(2009) Y.-G. Gao et al.   SCIENCE

A role for the 30S subunit E site in maintenance of the translational reading frame

(2008) A. Devaraj et al.   RNA