Differences in protein structural regions that impact functional specificity in GT2 family β-glucan synthases

Cell wall biomechanics: a tractable challenge in manipulating plant cell walls ‘fit for purpose’!

(2018) Kim L Johnson et al.   CURRENT OPINION IN BIOTECHNOLOGY

MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update)

(2018) Lukáš Pravda et al.   NUCLEIC ACIDS RESEARCH

Revised Phylogeny of theCellulose SynthaseGene Superfamily: Insights into Cell Wall Evolution

(2018) Alan Little et al.   PLANT PHYSIOLOGY

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

(1,3;1,4)-β-Glucan Biosynthesis by the CSLF6 Enzyme: Position and Flexibility of Catalytic Residues Influence Product Fine Structure

(2016) George Dimitroff et al.   BIOCHEMISTRY

CarbBuilder: Software for building molecular models of complex oligo- and polysaccharide structures

(2016) Michelle M. Kuttel et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Observing cellulose biosynthesis and membrane translocation in crystallo

(2016) Jacob L. W. Morgan et al.   NATURE

PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases

(2016) Evan W. Floden et al.   NUCLEIC ACIDS RESEARCH

Functional Analysis of Cellulose Synthase (CESA) Protein Class Specificity

(2016) Manoj Kumar et al.   PLANT PHYSIOLOGY

A single heterologously expressed plant cellulose synthase isoform is sufficient for cellulose microfibril formation in vitro

(2016) Pallinti Purushotham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative Structural and Computational Analysis Supports Eighteen Cellulose Synthases in the Plant Cellulose Synthesis Complex

(2016) B. Tracy Nixon et al.   Scientific Reports

A Molecular Description of Cellulose Biosynthesis

(2015) Joshua T. McNamara et al.   Annual Review of Biochemistry

Prediction of the structures of the plant-specific regions of vascular plant cellulose synthases and correlated functional analysis

(2015) Latsavongsakda Sethaphong et al.   CELLULOSE

Handicap-Recover Evolution Leads to a Chemically Versatile, Nucleophile-Permissive Protease

(2015) Thomas Shafee et al.   CHEMBIOCHEM

Insights into the structure and function of membrane-integrated processive glycosyltransferases

(2015) Yunchen Bi et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

How Cellulose Elongates—A QM/MM Study of the Molecular Mechanism of Cellulose Polymerization in Bacterial CESA

(2015) Hui Yang et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The I-TASSER Suite: protein structure and function prediction

(2015) Jianyi Yang et al.   NATURE METHODS

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

A Structural Study of CESA1 Catalytic Domain of Arabidopsis Cellulose Synthesis Complex: Evidence for CESA Trimers

(2015) Venu Gopal Vandavasi et al.   PLANT PHYSIOLOGY

Novel mixed-linkage β-glucan activated by c-di-GMP inSinorhizobium meliloti

(2015) Daniel Pérez-Mendoza et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial cellulose biosynthesis: diversity of operons, subunits, products, and functions

(2015) Ute Römling et al.   TRENDS IN MICROBIOLOGY

Membrane pore architecture of the CslF6 protein controls (1-3,1-4)- -glucan structure

(2015) S. A. Jobling   Science Advances

Callose biosynthesis in arabidopsis with a focus on pathogen response: what we have learned within the last decade

(2014) Dorothea Ellinger et al.   ANNALS OF BOTANY

The Cell Biology of Cellulose Synthesis

(2014) Heather E. McFarlane et al.   Annual Review of Plant Biology

Computational and genetic evidence that different structural conformations of a non-catalytic region affect the function of plant cellulose synthase

(2014) Erin Slabaugh et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mechanism of activation of bacterial cellulose synthase by cyclic di-GMP

(2014) Jacob L W Morgan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Structure of the Catalytic Domain of a Plant Cellulose Synthase and Its Assembly into Dimers

(2014) Anna T. Olek et al.   PLANT CELL

Computational modeling of membrane proteins

(2014) Julia Koehler Leman et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Tertiary model of a plant cellulose synthase

(2013) L. Sethaphong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Processive Carbohydrate Polymerase That Mediates Bifunctional Catalysis Using a Single Active Site

(2012) John F. May et al.   BIOCHEMISTRY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing

(2012) Thomas A. Hopf et al.   CELL

Crystallographic snapshot of cellulose synthesis and membrane translocation

(2012) Jacob L. W. Morgan et al.   NATURE

Template-based protein structure modeling using the RaptorX web server

(2012) Morten Källberg et al.   Nature Protocols

Protein 3D Structure Computed from Evolutionary Sequence Variation

(2011) Debora S. Marks et al.   PLoS One

Enzyme Promiscuity: A Mechanistic and Evolutionary Perspective

(2010) Olga Khersonsky and Dan S. Tawfik   Annual Review of Biochemistry

REVIEW: Variability in Fine Structures of Noncellulosic Cell Wall Polysaccharides from Cereal Grains: Potential Importance in Human Health and Nutrition

(2010) Helen M. Collins et al.   CEREAL CHEMISTRY

High-yield production, refolding and a molecular modelling of the catalytic module of (1,3)-β-d-glucan (curdlan) synthase from Agrobacterium sp.

(2010) Maria Hrmova et al.   GLYCOCONJUGATE JOURNAL

What Do We Really Know about Cellulose Biosynthesis in Higher Plants?

(2010) Gea Guerriero et al.   Journal of Integrative Plant Biology

Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types

(2010) Jeffery B. Klauda et al.   JOURNAL OF PHYSICAL CHEMISTRY B

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

A combined nuclear magnetic resonance and molecular dynamics study of the two structural motifs for mixed-linkage β-glucans: methyl β-cellobioside and methyl β-laminarabioside

(2009) Niels Johan Christensen et al.   CARBOHYDRATE RESEARCH

Exploring the evolution of (1,3;1,4)-β-d-glucans in plant cell walls: comparative genomics can help!

(2009) Geoffrey B Fincher   CURRENT OPINION IN PLANT BIOLOGY

Revolutionary Times in Our Understanding of Cell Wall Biosynthesis and Remodeling in the Grasses

(2009) G. B. Fincher   PLANT PHYSIOLOGY

Molecular Dynamics Studies of Side Chain Effect on the β-1,3-d-Glucan Triple Helix in Aqueous Solution

(2008) Tadashi Okobira et al.   BIOMACROMOLECULES

Additive empirical force field for hexopyranose monosaccharides

(2008) Olgun Guvench et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Jpred 3 secondary structure prediction server

(2008) C. Cole et al.   NUCLEIC ACIDS RESEARCH

Cellulose Synthesis in Phytophthora infestans Is Required for Normal Appressorium Formation and Successful Infection of Potato

(2008) L. J. Grenville-Briggs et al.   PLANT CELL